RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ENKD1Q9H0I2 346 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 TMPRSS11EQ9UL52 423 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 TBX22Q9Y458 520 aa6.79□□□□□ -1.32
SNHG1-224ENST00000545688 NRP1O14786 923 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 KDM1AO60341 852 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 IPO13O94829 963 aaKnown RBP6.78□□□□□ -1.32
SNHG1-224ENST00000545688 CFBP00751 764 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 ADH4P08319 380 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 CLEC2LP0C7M8 214 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-224ENST00000545688 TGFB2P61812 414 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 PPARAQ07869 468 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 FRMD7Q6ZUT3 714 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 HTR3DQ70Z44 454 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
SNHG1-224ENST00000545688 AMER2Q8N7J2 671 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 ST8SIA2Q92186 375 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 LARP4BQ92615 738 aaKnown RBP6.78□□□□□ -1.32
SNHG1-224ENST00000545688 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 PRDM12Q9H4Q4 367 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 NUMBLQ9Y6R0 609 aa6.78□□□□□ -1.32
SNHG1-224ENST00000545688 NRP2O60462 931 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 FAM20BO75063 409 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 PEX11BO96011 259 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 GNAT2P19087 354 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 MAKP20794 623 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 CASRP41180 1078 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 GPR15P49685 360 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 MGAT5Q09328 741 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 PLEKHG4Q58EX7 1191 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 APBB1IPQ7Z5R6 666 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-224ENST00000545688 NOP9Q86U38 636 aaKnown RBP6.77□□□□□ -1.33
SNHG1-224ENST00000545688 LYSMD2Q8IV50 215 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 MENTQ9BUN1 341 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 SLITRK6Q9H5Y7 841 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 MAPRE3Q9UPY8 281 aa6.77□□□□□ -1.33
SNHG1-224ENST00000545688 A0A1W2PR48 441 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 GOLGA6L6A8MZA4 724 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-224ENST00000545688 RAB11FIP3O75154 756 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 HK1P19367 917 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 NRG3P56975 720 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 TRIM25Q14258 630 aaKnown RBP6.76□□□□□ -1.33
SNHG1-224ENST00000545688 ATP13A4Q4VNC1 1196 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 CCDC62Q6P9F0 684 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 LMBR1LQ6UX01 489 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 TAS1R1Q7RTX1 841 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 OR5M3Q8NGP4 307 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 GPRC5BQ9NZH0 403 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 EVLQ9UI08 416 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-224ENST00000545688 PRSS50Q9UI38 385 aa6.76□□□□□ -1.33
SNHG1-224ENST00000545688 BPIP17213 487 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 GYS2P54840 703 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 RABL3Q5HYI8 236 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 RASSF3Q86WH2 238 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 SLC41A1Q8IVJ1 513 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 GLB1L2Q8IW92 636 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 USP7Q93009 1102 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 CHFRQ96EP1 664 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 WNT8AQ9H1J5 351 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 EPC1Q9H2F5 836 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
SNHG1-224ENST00000545688 NOC2LQ9Y3T9 749 aaKnown RBP6.75□□□□□ -1.33
SNHG1-224ENST00000545688 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 ID4P47928 161 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 DUSP2Q05923 314 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 DPTQ07507 201 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 DHCR24Q15392 516 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 DCAF17Q5H9S7 520 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-224ENST00000545688 CRB2Q5IJ48 1285 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 NAIF1Q69YI7 327 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-224ENST00000545688 RNF180Q86T96 592 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 THNSL2Q86YJ6 484 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 IL17RAQ96F46 866 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 CPPED1Q9BRF8 314 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-224ENST00000545688 IKZF4Q9H2S9 585 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 NRDE2Q9H7Z3 1164 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 KCNG1Q9UIX4 513 aa6.74□□□□□ -1.33
SNHG1-224ENST00000545688 NEMP1O14524 444 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 LPLP06858 475 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 MRPL49Q13405 166 aaKnown RBP6.73□□□□□ -1.33
SNHG1-224ENST00000545688 PDCD1Q15116 288 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 UBE3CQ15386 1083 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 CT83Q5H943 113 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 PITRM1Q5JRX3 1037 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 LDLRAD3Q86YD5 345 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 OR14C36Q8NHC7 312 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 CPEB1Q9BZB8 566 aaKnown RBP6.73□□□□□ -1.33
SNHG1-224ENST00000545688 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
SNHG1-224ENST00000545688 WDR33Q9C0J8 1336 aaKnown RBP6.73□□□□□ -1.33
SNHG1-224ENST00000545688 LTA4HP09960 611 aaKnown RBP6.72□□□□□ -1.33
SNHG1-224ENST00000545688 WNT3AP56704 352 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 HDGFL2Q7Z4V5 671 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-224ENST00000545688 ZNF276Q8N554 614 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 UBR7Q8N806 425 aa6.72□□□□□ -1.33
SNHG1-224ENST00000545688 OR52N2Q8NGI0 321 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms