RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 SLC7A3Q8WY07 619 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 SAAL1Q96ER3 474 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 EPC1Q9H2F5 836 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
CHFR-224ENST00000545046 ARHGAP28Q9P2N2 729 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 NAGPAQ9UK23 515 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 PNMA3Q9UL41 463 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 ADGRA3Q8IWK6 1321 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 PMM2O15305 246 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 ADRB2P07550 413 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 PRLRP16471 622 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 GARTP22102 1010 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 GJA5P36382 358 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 RFC5P40937 340 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 MXI1P50539 228 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 STRN3Q13033 797 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 C1orf220Q5T0J3 134 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 PHLDB3Q6NSJ2 640 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 ALKBH5Q6P6C2 394 aaKnown RBP18.06■□□□□ 0.48
CHFR-224ENST00000545046 CBWD2Q8IUF1 395 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 RPGRIP1Q96KN7 1286 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 PARD6BQ9BYG5 372 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 SNX12Q9UMY4 172 aa18.06■□□□□ 0.48
CHFR-224ENST00000545046 BTNL10A8MVZ5 291 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 TULP1O00294 542 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 PNMA6AP0CW24 399 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 KLRC1P26715 233 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 TCF7P36402 384 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 ARHGAP44Q17R89 818 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 CAGE1Q8TC20 777 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 PLEKHO2Q8TD55 490 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 GTF3C2Q8WUA4 911 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 TMEM143Q96AN5 459 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 PCYT2Q99447 389 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 PORCNQ9H237 461 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 AZI2Q9H6S1 392 aa18.05■□□□□ 0.48
CHFR-224ENST00000545046 UBE2TQ9NPD8 197 aaPredicted RBP18.05■□□□□ 0.48
CHFR-224ENST00000545046 DNAJC25-GNG10A0A024R161 153 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 UNCXA6NJT0 531 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 SLC39A4Q6P5W5 647 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 GPD1LQ8N335 351 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 SHCBP1Q8NEM2 672 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 PACSIN1Q9BY11 444 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 ZNF408Q9H9D4 720 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 TSKSQ9UJT2 592 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
CHFR-224ENST00000545046 HYOU1Q9Y4L1 999 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 NAMPTP43490 491 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 LIG4P49917 911 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 IFI16Q16666 785 aaKnown RBP18.04■□□□□ 0.48
CHFR-224ENST00000545046 DEPTORQ8TB45 409 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 PARD3BQ8TEW8 1205 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 FAM167AQ96KS9 214 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 FGD4Q96M96 766 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 MFSD14AQ96MC6 490 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 FBXL18Q96ME1 805 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 MMS19Q96T76 1030 aa18.04■□□□□ 0.48
CHFR-224ENST00000545046 ATP8B3O60423 1300 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 SOCS7O14512 581 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 TCP1P17987 556 aaKnown RBP18.03■□□□□ 0.48
CHFR-224ENST00000545046 ARL2P36404 184 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 TAS1R3Q7RTX0 852 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 CCDC127Q96BQ5 260 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 GPR88Q9GZN0 384 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 PPME1Q9Y570 386 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 MCM3APO60318 1980 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 LRRIQ4A6NIV6 560 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 NOP56O00567 594 aaKnown RBP18.03■□□□□ 0.48
CHFR-224ENST00000545046 GLRA2P23416 452 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
CHFR-224ENST00000545046 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
CHFR-224ENST00000545046 KRT39Q6A163 491 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 U2AF1L4Q8WU68 220 aaKnown RBP18.03■□□□□ 0.48
CHFR-224ENST00000545046 KIAA1586Q9HCI6 787 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 INTUQ9ULD6 942 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 USP20Q9Y2K6 914 aa18.03■□□□□ 0.48
CHFR-224ENST00000545046 LRRIQ3A6PVS8 624 aaPredicted RBP18.02■□□□□ 0.48
CHFR-224ENST00000545046 K7ERI5 159 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 DDX3XO00571 662 aaKnown RBP eCLIP18.02■□□□□ 0.48
CHFR-224ENST00000545046 PALMO75781 387 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 ARIH2O95376 493 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 H2AFZP0C0S5 128 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
CHFR-224ENST00000545046 ENPEPQ07075 957 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 CYP24A1Q07973 514 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 TARBP2Q15633 366 aaKnown RBP18.02■□□□□ 0.48
CHFR-224ENST00000545046 H2AFVQ71UI9 128 aa18.02■□□□□ 0.48
CHFR-224ENST00000545046 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms