RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 NOTUMQ6P988 496 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 SFR1Q86XK3 245 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 SPATA20Q8TB22 786 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 VWCEQ96DN2 955 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
SNHG1-221ENST00000544983 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
SNHG1-221ENST00000544983 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
SNHG1-221ENST00000544983 BLZF1Q9H2G9 400 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 MINDY3Q9H8M7 445 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 CNTNAP2Q9UHC6 1331 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 K7ENM7 598 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 RHOBTB3O94955 611 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 KCNJ6P48051 423 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 RAB27AP51159 221 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
SNHG1-221ENST00000544983 SCN5AQ14524 2016 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 AMHR2Q16671 573 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 NT5DC1Q5TFE4 455 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 ZPBP2Q6X784 338 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 SLC24A5Q71RS6 500 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 GRAMD1CQ8IYS0 662 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 SMARCE1Q969G3 411 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
SNHG1-221ENST00000544983 STRA6Q9BX79 667 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 POLD4Q9HCU8 107 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 RGS18Q9NS28 235 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 TBX20Q9UMR3 447 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 SIP14410 1827 aa12.92□□□□□ -0.34
SNHG1-221ENST00000544983 UBE4BO95155 1302 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 N4BP3O15049 544 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 KLRC4O43908 158 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 TSPAN1O60635 241 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 CSDE1O75534 798 aaKnown RBP12.91□□□□□ -0.34
SNHG1-221ENST00000544983 PPP1R37O75864 691 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 GCNT3O95395 438 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 PIGRP01833 764 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 ACRP10323 421 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 HOXA11P31270 313 aaPredicted RBP12.91□□□□□ -0.34
SNHG1-221ENST00000544983 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
SNHG1-221ENST00000544983 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
SNHG1-221ENST00000544983 DSC3Q14574 896 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 RASIP1Q5U651 963 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 MAP4K3Q8IVH8 894 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.347e-26■□□□□ 10.9
SNHG1-221ENST00000544983 ADPGKQ9BRR6 497 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 KIFC3Q9BVG8 833 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
SNHG1-221ENST00000544983 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
SNHG1-221ENST00000544983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 A0A0U1RQF3 1178 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ENPP3O14638 875 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ZNF623O75123 536 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 TOM1L1O75674 476 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 EOMESO95936 686 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 AMHP03971 560 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 PPP1R2P41236 205 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 EPHB4P54760 987 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 FAM189BP81408 668 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 PNOCQ13519 176 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 KYAT1Q16773 422 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ADAM2Q99965 735 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
SNHG1-221ENST00000544983 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
SNHG1-221ENST00000544983 A0A0C4DFX4 3053 aa12.9□□□□□ -0.35
SNHG1-221ENST00000544983 C9IYK1 514 aa12.89□□□□□ -0.35
SNHG1-221ENST00000544983 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
SNHG1-221ENST00000544983 HOXA2O43364 376 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms