RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SMARCE1Q969G3 411 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CPB2Q96IY4 423 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FZD8Q9H461 694 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 AGPAT5Q9NUQ2 364 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TNRC18O15417 2968 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ABHD14A-ACY1A0A1B0GW23 586 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ACKR2O00590 384 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 B4GALT5O43286 388 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TSPAN1O60635 241 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 BAIAP3O94812 1187 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PTMSP20962 102 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 KCNJ6P48051 423 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 AMHR2Q16671 573 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FAM187BQ17R55 369 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ZC2HC1CQ53FD0 456 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TAS1R3Q7RTX0 852 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 BICD1Q96G01 975 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ADAM2Q99965 735 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 NUP62CLQ9H1M0 184 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MTIF3Q9H2K0 278 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TMX1Q9H3N1 280 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 SLC39A2Q9NP94 309 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CHST12Q9NRB3 414 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TBX20Q9UMR3 447 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PCDHB13Q9Y5F0 798 aa15.92■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CNTNAP2Q9UHC6 1331 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 EFCAB14O75071 495 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MYBP10242 640 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 IBSPP21815 317 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 AXLP30530 894 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CASP5P51878 434 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 GTF2BQ00403 316 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PSMD2Q13200 908 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ALCAMQ13740 583 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TWF2Q6IBS0 349 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 NOTUMQ6P988 496 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MRPL4Q9BYD3 311 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FGFBP2Q9BYJ0 223 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ST6GALNAC4Q9H4F1 302 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 RMND1Q9NWS8 449 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 USP20Q9Y2K6 914 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PCDHA5Q9Y5H7 936 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PDE4DIPQ5VU43 2346 aa15.91■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MGEA5O60502 916 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 HOXA11P31270 313 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 EHHADHQ08426 723 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 KCNB1Q14721 858 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 C9orf50Q5SZB4 431 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FAM43BQ6ZT52 329 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 HERVK_113Q902F9 699 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 HVCN1Q96D96 273 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 GSDMAQ96QA5 445 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 RGS18Q9NS28 235 aa15.9■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TTLL13PA6NNM8 815 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ENPP3O14638 875 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HNRNPDLO14979 420 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PRPF6O94906 941 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RHOBTB3O94955 611 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 AMHP03971 560 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EDN1P05305 212 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LIG4P49917 911 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 DSC3Q14574 896 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SHHQ15465 462 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NT5DC1Q5TFE4 455 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ATF7IP2Q5U623 682 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RTN4RL1Q86UN2 441 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CDR2LQ86X02 465 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RNPC3Q96LT9 517 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TARS2Q9BW92 718 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TRIM6Q9C030 488 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 C1orf112Q9NSG2 853 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EXOC7Q9UPT5 735 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 A0A1B0GUA9 196 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 N4BP3O15049 544 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EIF3DO15371 548 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PPP1R37O75864 691 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 BMP8BP34820 402 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MATR3P43243 847 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 WDR5P61964 334 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 STK4Q13043 487 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SLC24A5Q71RS6 500 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MAP4K3Q8IVH8 894 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MYOCDQ8IZQ8 938 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SYCP3Q8IZU3 236 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LINC01599Q8WXQ3 324 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KCNN1Q92952 543 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ACCSQ96QU6 501 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ACO2Q99798 780 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ADPGKQ9BRR6 497 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TCHPQ9BT92 498 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CXXC1Q9P0U4 656 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms