RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 FAN1Q9Y2M0 1017 aa22.38■■□□□ 1.17
LPCAT3-211ENST00000543794 SPDYE4A6NLX3 237 aa22.37■■□□□ 1.17
LPCAT3-211ENST00000543794 HSPA4P34932 840 aa22.37■■□□□ 1.17
LPCAT3-211ENST00000543794 MOXD1Q6UVY6 613 aa22.37■■□□□ 1.17
LPCAT3-211ENST00000543794 CMASQ8NFW8 434 aaPredicted RBP22.37■■□□□ 1.17
LPCAT3-211ENST00000543794 MRPL17Q9NRX2 175 aaKnown RBP22.37■■□□□ 1.17
LPCAT3-211ENST00000543794 M0R2N6 131 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 NRP1O14786 923 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 SSBP05455 408 aaKnown RBP eCLIP22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 HOXA11P31270 313 aaPredicted RBP22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 CCT2P78371 535 aaKnown RBP22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 CCDC105Q8IYK2 499 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 FAM193BQ96PV7 902 aaPredicted RBP22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 RTP3Q9BQQ7 232 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 NCOA5Q9HCD5 579 aaKnown RBP22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 IGSF9Q9P2J2 1179 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 COL4A3BPQ9Y5P4 624 aa22.36■■□□□ 1.17
LPCAT3-211ENST00000543794 CNTNAP2Q9UHC6 1331 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 UBXN11Q5T124 520 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 PLA2G4FQ68DD2 849 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 SRGAP1Q7Z6B7 1085 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 RHOBTB2Q9BYZ6 727 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 DCHS1Q96JQ0 3298 aa22.35■■□□□ 1.17
LPCAT3-211ENST00000543794 EML1O00423 815 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 SOD2P04179 222 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 QARSP47897 775 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 NPEPPSP55786 919 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 CYP26C1Q6V0L0 522 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 EXOC8Q8IYI6 725 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 BLIDQ8IZY5 108 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 ADSSL1Q8N142 457 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 SIX5Q8N196 739 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 DTWD2Q8NBA8 298 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 PRPF31Q8WWY3 499 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 SLC7A3Q8WY07 619 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 RPS6KC1Q96S38 1066 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 DHX33Q9H6R0 707 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 MINDY3Q9H8M7 445 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 FBXL21Q9UKT6 434 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 SSX2IPQ9Y2D8 614 aa22.34■■□□□ 1.17
LPCAT3-211ENST00000543794 N4BP1O75113 896 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 POMCP01189 267 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 PPP2R5CQ13362 524 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 ANGPT1Q15389 498 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 ZNF579Q8NAF0 562 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 DAGLBQ8NCG7 672 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 WDR6Q9NNW5 1121 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 MAN1C1Q9NR34 630 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 WNT16Q9UBV4 365 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 DDX25Q9UHL0 483 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 PPME1Q9Y570 386 aa22.33■■□□□ 1.17
LPCAT3-211ENST00000543794 C2CD2LO14523 706 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 DKC1O60832 514 aaKnown RBP eCLIP22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 EFEMP2O95967 443 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 URODP06132 367 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 PSMA5P28066 241 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 SSRP1Q08945 709 aaKnown RBP22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 NPY5RQ15761 445 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 GALNT17Q6IS24 598 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 TAS1R1Q7RTX1 841 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 RNF168Q8IYW5 571 aaPredicted RBP22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 CNNM3Q8NE01 707 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 PSPC1Q8WXF1 523 aaKnown RBP22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 TMEM143Q96AN5 459 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 CEP170P1Q96L14 293 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 HERC2P3Q9BVR0 1158 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 UBN1Q9NPG3 1134 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 MARCH5Q9NX47 278 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 DPP7Q9UHL4 492 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 DENND4AQ7Z401 1863 aa22.32■■□□□ 1.16
LPCAT3-211ENST00000543794 CCDC195A0A1B0GUA6 201 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 TEX28O15482 410 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 NARSO43776 548 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 DEXIO95424 95 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 P4HBP07237 508 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 ADH1AP07327 375 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 AK2P54819 239 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 LAMTOR4Q0VGL1 99 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 KIAA0319Q5VV43 1072 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 ERMP1Q7Z2K6 904 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 COLGALT2Q8IYK4 626 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 FAM177A1Q8N128 213 aaPredicted RBP22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 SMG8Q8ND04 991 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 FAM20AQ96MK3 541 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 RXFP1Q9HBX9 757 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 WRAP73Q9P2S5 460 aaPredicted RBP22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 EPS15L1Q9UBC2 864 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 VAV3Q9UKW4 847 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 GVINP1Q7Z2Y8 2422 aa22.31■■□□□ 1.16
LPCAT3-211ENST00000543794 INPPL1O15357 1258 aa22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 ASAP2O43150 1006 aa22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 SLC37A4O43826 429 aa22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 PAPLNO95428 1278 aa22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 RFC5P40937 340 aa22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 NONOQ15233 471 aaKnown RBP eCLIP22.3■■□□□ 1.16
LPCAT3-211ENST00000543794 CENPQQ7L2Z9 268 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms