RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	FZD8	Q9H461	694 aa		11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	MAPK8IP1	Q9UQF2	711 aa		11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	PIN4	Q9Y237	131 aa	Known RBP	11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	USP20	Q9Y2K6	914 aa		11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	GDA	Q9Y2T3	454 aa		11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	MYH9	P35579	1960 aa	Known RBP	11.16	□□□□□ -0.62
CPSF7-221	ENST00000543545	FRMPD3	Q5JV73	1810 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	RBAK-RBAKDN	I3L0D1	243 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	TULP1	O00294	542 aa	Predicted RBP	11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	B4GALT5	O43286	388 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	TSPAN1	O60635	241 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	LETM1	O95202	739 aa	Predicted RBP	11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	LIG4	P49917	911 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	CASP5	P51878	434 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	EHHADH	Q08426	723 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	STIM1	Q13586	685 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	NT5DC1	Q5TFE4	455 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	TRIML1	Q8N9V2	468 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	KIAA0895	Q8NCT3	520 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	SPATA20	Q8TB22	786 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	APBB2	Q92870	758 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	HVCN1	Q96D96	273 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	CPB2	Q96IY4	423 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	PRIMPOL	Q96LW4	560 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	TARS2	Q9BW92	718 aa	Known RBP	11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	CCDC113	Q9H0I3	377 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	ST6GALNAC4	Q9H4F1	302 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	TMEM206	Q9H813	350 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	ERVK-5	Q9HDB9	667 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	IL23A	Q9NPF7	189 aa		11.15	□□□□□ -0.62
CPSF7-221	ENST00000543545	HNRNPDL	O14979	420 aa	Known RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	EIF3D	O15371	548 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	FGB	P02675	491 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	CXCL10	P02778	98 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	PFKM	P08237	780 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	HARS	P12081	509 aa	Known RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ACTN1	P12814	892 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ARF4	P18085	180 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	AXL	P30530	894 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	RGS19	P49795	217 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	MLLT1	Q03111	559 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	KCNA1	Q09470	495 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	MORC3	Q14149	939 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	IKBKE	Q14164	716 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	GPNMB	Q14956	572 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	AMHR2	Q16671	573 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	FAM187B	Q17R55	369 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	PLEKHG4	Q58EX7	1191 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ATF7IP2	Q5U623	682 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	TWF2	Q6IBS0	349 aa	Known RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	KLHL10	Q6JEL2	608 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	NOTUM	Q6P988	496 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	PPP4R3CP	Q6ZMV5	832 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	HS2ST1	Q7LGA3	356 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	TAS1R3	Q7RTX0	852 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ZBTB33	Q86T24	672 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	CDR2L	Q86X02	465 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ZNF507	Q8TCN5	953 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	SCFD1	Q8WVM8	642 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ADAM2	Q99965	735 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	ADPGK	Q9BRR6	497 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	FTHL17	Q9BXU8	183 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	TRIM6	Q9C030	488 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	GZF1	Q9H116	711 aa	Predicted RBP	11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	CHST12	Q9NRB3	414 aa		11.14	□□□□□ -0.63
CPSF7-221	ENST00000543545	TTLL13P	A6NNM8	815 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	ZBBX	A8MT70	800 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545		H0YGN5	161 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	PSMA7	O14818	248 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	N4BP3	O15049	544 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	PPP1R37	O75864	691 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	HOXA11	P31270	313 aa	Predicted RBP	11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	PRCP	P42785	496 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	NLRP12	P59046	1061 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	KNOP1	Q1ED39	458 aa	Known RBP	11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	CNKSR3	Q6P9H4	555 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	ZPBP2	Q6X784	338 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	MAP4K3	Q8IVH8	894 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	RNF169	Q8NCN4	708 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	NOC3L	Q8WTT2	800 aa	Known RBP	11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	ACO2	Q99798	780 aa	Known RBP	11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	STRA6	Q9BX79	667 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	GBP3	Q9H0R5	595 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	TMX1	Q9H3N1	280 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	AGPAT5	Q9NUQ2	364 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	ANKFY1	Q9P2R3	1169 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	TNFSF13B	Q9Y275	285 aa		11.13	□□□□□ -0.63
CPSF7-221	ENST00000543545	UBE4B	O95155	1302 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	CNTNAP2	Q9UHC6	1331 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545		A0A1B0GUA9	196 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	SYCE3	A1L190	88 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	ENPP3	O14638	875 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	CLDN3	O15551	220 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	CALU	O43852	315 aa	Predicted RBP	11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	TOM1L1	O75674	476 aa		11.12	□□□□□ -0.63
CPSF7-221	ENST00000543545	NPTXR	O95502	500 aa		11.12	□□□□□ -0.63

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