RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 XIRP1Q702N8 1843 aaKnown RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 TTLL1O95922 423 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 TRIM49P0CI25 452 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 TRIM49CP0CI26 452 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 COG2Q14746 738 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 LLGL1Q15334 1064 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 ZC2HC1CQ53FD0 456 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 SEL1L2Q5TEA6 688 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 RHOT2Q8IXI1 618 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 MARCH10Q8NA82 808 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 RUNDC3BQ96NL0 473 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 ZSWIM1Q9BR11 485 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 ROPN1BQ9BZX4 212 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 ROPN1Q9HAT0 212 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 PFASO15067 1338 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 MIF4GDA9UHW6 222 aaKnown RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 FOXN3O00409 490 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 FTLP02792 175 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 POLD1P28340 1107 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 NMT1P30419 496 aaKnown RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 SLC20A1Q8WUM9 679 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 CDK5RAP2Q96SN8 1893 aa25.51■■□□□ 1.67
SHD-201ENST00000543264 POP1Q99575 1024 aaKnown RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 INTS2Q9H0H0 1204 aaKnown RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 ZNF335Q9H4Z2 1342 aaPredicted RBP25.51■■□□□ 1.67
SHD-201ENST00000543264 SLC26A4O43511 780 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 PYGMP11217 842 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 COILP38432 576 aaPredicted RBP25.5■■□□□ 1.67
SHD-201ENST00000543264 PEX19P40855 299 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 VSTM1Q6UX27 236 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 TPTE2Q6XPS3 522 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 CDC42EP4Q9H3Q1 356 aaKnown RBP25.5■■□□□ 1.67
SHD-201ENST00000543264 ADAM22Q9P0K1 906 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 LACTBP83111 547 aaPredicted RBP25.5■■□□□ 1.67
SHD-201ENST00000543264 CAPRIN2Q6IMN6 1127 aaKnown RBP25.5■■□□□ 1.67
SHD-201ENST00000543264 ARMC2Q8NEN0 867 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 AGPAT1Q99943 283 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 CTNNAL1Q9UBT7 734 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 APEX2Q9UBZ4 518 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 PCDHA1Q9Y5I3 950 aa25.5■■□□□ 1.67
SHD-201ENST00000543264 GH1P01241 217 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 ALAS1P13196 640 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 COMTP21964 271 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 CYP2J2P51589 502 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 IRX1P78414 480 aaPredicted RBP25.49■■□□□ 1.67
SHD-201ENST00000543264 ATP11AP98196 1134 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 GRIK3Q13003 919 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 CTTNQ14247 550 aaKnown RBP25.49■■□□□ 1.67
SHD-201ENST00000543264 KCNV2Q8TDN2 545 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 RMDN2Q96LZ7 410 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 RXFP1Q9HBX9 757 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 CYP3A7-CYP3A51PA0A087WV96 503 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 CYP3A7P24462 503 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 CALCOCO2Q13137 446 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 ETNPPLQ8TBG4 499 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 KIF9Q9HAQ2 790 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 BCS1LQ9Y276 419 aa25.49■■□□□ 1.67
SHD-201ENST00000543264 GJB6O95452 261 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 ATP2A2P16615 1042 aaKnown RBP25.48■■□□□ 1.67
SHD-201ENST00000543264 ANKRD20A2Q5SQ80 823 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 ANKRD20A1Q5TYW2 823 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 ANKRD20A3Q5VUR7 823 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 MYCT1Q8N699 235 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 PASKQ96RG2 1323 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 PEX5P50542 639 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 ARHGAP4P98171 946 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 MPP2Q14168 576 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 PHLDB3Q6NSJ2 640 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 ZNF746Q6NUN9 644 aaPredicted RBP25.48■■□□□ 1.67
SHD-201ENST00000543264 ASRGL1Q7L266 308 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 CKAP2Q8WWK9 683 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 FAM167BQ9BTA0 163 aa25.48■■□□□ 1.67
SHD-201ENST00000543264 EIF4E1BA6NMX2 242 aaKnown RBP25.47■■□□□ 1.67
SHD-201ENST00000543264 UBAP1LF5GYI3 381 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 SMNDC1O75940 238 aaKnown RBP eCLIP25.47■■□□□ 1.67
SHD-201ENST00000543264 ADCY1Q08828 1119 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 QRICH1Q2TAL8 776 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 TRMT10CQ7L0Y3 403 aaKnown RBP25.47■■□□□ 1.67
SHD-201ENST00000543264 RDH13Q8NBN7 331 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 CRAMP1Q96RY5 1269 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 DNAJC17Q9NVM6 304 aaKnown RBP25.47■■□□□ 1.67
SHD-201ENST00000543264 RGL1Q9NZL6 768 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 MTUS1Q9ULD2 1270 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 FRMPD4Q14CM0 1322 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 IGKV6D-41A0A0C4DH26 115 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 C11orf63Q6NUN7 778 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 CPNE8Q86YQ8 564 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 PIGOQ8TEQ8 1089 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 TGS1Q96RS0 853 aaKnown RBP25.47■■□□□ 1.67
SHD-201ENST00000543264 ARHGEF10LQ9HCE6 1279 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 CD209Q9NNX6 404 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 RABGAP1Q9Y3P9 1069 aa25.47■■□□□ 1.67
SHD-201ENST00000543264 O00370 1275 aa25.46■■□□□ 1.67
SHD-201ENST00000543264 MPHOSPH10O00566 681 aaKnown RBP25.46■■□□□ 1.67
SHD-201ENST00000543264 FAM13AO94988 1023 aa25.46■■□□□ 1.67
SHD-201ENST00000543264 RRP1BQ14684 758 aaKnown RBP25.46■■□□□ 1.67
SHD-201ENST00000543264 GPATCH4Q5T3I0 446 aaKnown RBP25.46■■□□□ 1.67
SHD-201ENST00000543264 MIS18BP1Q6P0N0 1132 aa25.46■■□□□ 1.67
SHD-201ENST00000543264 CYFIP1Q7L576 1253 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms