RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 IFT43Q96FT9 208 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 MXD3Q9BW11 206 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 CDC42EP4Q9H3Q1 356 aaKnown RBP10.45□□□□□ -0.74
TCF4-208ENST00000543082 DCLRE1BQ9H816 532 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 PIDD1Q9HB75 910 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 BIN2Q9UBW5 565 aaPredicted RBP10.45□□□□□ -0.74
TCF4-208ENST00000543082 USH1CQ9Y6N9 552 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 IGSF9BQ9UPX0 1349 aa10.45□□□□□ -0.74
TCF4-208ENST00000543082 GTPBP10A4D1E9 387 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 PDLIM1O00151 329 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MAPK13O15264 365 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MAP3K13O43283 966 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 PLCG2P16885 1265 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 VHLP40337 213 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 RFC5P40937 340 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TBC1D25Q3MII6 688 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 SPDYAQ5MJ70 313 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 HYIQ5T013 277 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 SEL1L2Q5TEA6 688 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 OR52E8Q6IFG1 317 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 C11orf63Q6NUN7 778 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TTC27Q6P3X3 843 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 SESTD1Q86VW0 696 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 LONP2Q86WA8 852 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 ALG3Q92685 438 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 FAM136AQ96C01 138 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 ERP27Q96DN0 273 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 ZNF333Q96JL9 665 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 FGD4Q96M96 766 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 PITPNM3Q9BZ71 974 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 MLXIPLQ9NP71 852 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MCM9Q9NXL9 1143 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 GCNT4Q9P109 453 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 AJAP1Q9UKB5 411 aaPredicted RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 USP20Q9Y2K6 914 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 STARD13Q9Y3M8 1113 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 WNK3Q9BYP7 1800 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 PITPNM1O00562 1244 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 HGSO14964 777 aaPredicted RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 SLC16A3O15427 465 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 SLC26A4O43511 780 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TDP2O95551 362 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TSPY3P0CV98 308 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TSPY8P0CW00 308 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 SKIP12755 728 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 GM2AP17900 193 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 IL6STP40189 918 aaPredicted RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 HADHBP55084 474 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 IL9RQ01113 521 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MECOMQ03112 1051 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 UBE4AQ14139 1066 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 CYP1B1Q16678 543 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 DCAF17Q5H9S7 520 aaPredicted RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 SDCCAG8Q86SQ7 713 aaPredicted RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 GLYCTKQ8IVS8 523 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 RHOT2Q8IXI1 618 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 OLIG1Q8TAK6 271 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 DDX17Q92841 729 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 LRRC37BQ96QE4 947 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 EPAS1Q99814 870 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
TCF4-208ENST00000543082 TMEM260Q9NX78 707 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MTUS1Q9ULD2 1270 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 MTMR7Q9Y216 660 aa10.44□□□□□ -0.74
TCF4-208ENST00000543082 TRAFD1O14545 582 aaPredicted RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 CALUO43852 315 aaPredicted RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 ECE2O60344 883 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 HNRNPCL1O60812 293 aaKnown RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 TCEA3O75764 348 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 GH1P01241 217 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 GOLGA8HP0CJ92 632 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 CREB1P16220 341 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 TAC1P20366 129 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 ABCB4P21439 1286 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 SMARCA1P28370 1054 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 SOX5P35711 763 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 COILP38432 576 aaPredicted RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 ECM1Q16610 540 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 ZC3H12AQ5D1E8 599 aaKnown RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 CCDC105Q8IYK2 499 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 FAM81AQ8TBF8 368 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 LRRC8CQ8TDW0 803 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 TMEM47Q9BQJ4 181 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 TBC1D10AQ9BXI6 508 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 FAM192AQ9GZU8 254 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 MKNK2Q9HBH9 465 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 TMOD4Q9NZQ9 345 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 HAO1Q9UJM8 370 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 RTCBQ9Y3I0 505 aaKnown RBP10.43□□□□□ -0.74
TCF4-208ENST00000543082 ACTL7BQ9Y614 415 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 ANKRD62A6NC57 917 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
TCF4-208ENST00000543082 ACSL3O95573 720 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms