RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 GLIS3Q8NEA6 775 aa25.38■■□□□ 1.65
HOMER3-205ENST00000542541 SCFD1Q8WVM8 642 aa25.38■■□□□ 1.65
HOMER3-205ENST00000542541 NOC2LQ9Y3T9 749 aaKnown RBP25.38■■□□□ 1.65
HOMER3-205ENST00000542541 SYCE3A1L190 88 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 GHRP10912 638 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 BMP6P22004 513 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 RFC2P35250 354 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 CCL23P55773 120 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 PRPF4BQ13523 1007 aaKnown RBP25.37■■□□□ 1.65
HOMER3-205ENST00000542541 LPIN1Q14693 890 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 TAS1R3Q7RTX0 852 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 SYCP3Q8IZU3 236 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 MRPL4Q9BYD3 311 aaKnown RBP25.37■■□□□ 1.65
HOMER3-205ENST00000542541 WNT8AQ9H1J5 351 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 ANO10Q9NW15 660 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 DACH1Q9UI36 760 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 CAPN15O75808 1086 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 CCDC192P0DO97 292 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 PRCPP42785 496 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 PAK2Q13177 524 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 SMYD4Q8IYR2 804 aaPredicted RBP25.37■■□□□ 1.65
HOMER3-205ENST00000542541 TMEM199Q8N511 208 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 ST3GAL5Q9UNP4 418 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 MAPK8IP1Q9UQF2 711 aa25.37■■□□□ 1.65
HOMER3-205ENST00000542541 AXLP30530 894 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 NFX1Q12986 1120 aaKnown RBP25.36■■□□□ 1.65
HOMER3-205ENST00000542541 MBTPS1Q14703 1052 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 STX1AQ16623 288 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 KNOP1Q1ED39 458 aaKnown RBP25.36■■□□□ 1.65
HOMER3-205ENST00000542541 TMEM132AQ24JP5 1023 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 MFSD5Q6N075 450 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 FAM228AQ86W67 206 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 ADSSL1Q8N142 457 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 BICD1Q96G01 975 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
HOMER3-205ENST00000542541 PSMA7O14818 248 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 ZPBP2Q6X784 338 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 NELFCDQ8IXH7 590 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 DHTKD1Q96HY7 919 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-205ENST00000542541 SCLYQ96I15 445 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 GZF1Q9H116 711 aaPredicted RBP25.35■■□□□ 1.65
HOMER3-205ENST00000542541 AGO3Q9H9G7 860 aaKnown RBP25.35■■□□□ 1.65
HOMER3-205ENST00000542541 PADI3Q9ULW8 664 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 NR2E3Q9Y5X4 410 aa25.35■■□□□ 1.65
HOMER3-205ENST00000542541 HNRNPDLO14979 420 aaKnown RBP25.34■■□□□ 1.65
HOMER3-205ENST00000542541 TSPAN1O60635 241 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 FGFR4P22455 802 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 LIG4P49917 911 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 KCNA1Q09470 495 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 AMHR2Q16671 573 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 CT47A1Q5JQC4 288 aaPredicted RBP25.34■■□□□ 1.65
HOMER3-205ENST00000542541 IFIH1Q9BYX4 1025 aaKnown RBP25.34■■□□□ 1.65
HOMER3-205ENST00000542541 GBP3Q9H0R5 595 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 CHST12Q9NRB3 414 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 CNTNAP2Q9UHC6 1331 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 NBNO60934 754 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 PIGRP01833 764 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 CD52P31358 61 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 RGS19P49795 217 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 SNRPFP62306 86 aaKnown RBP25.34■■□□□ 1.65
HOMER3-205ENST00000542541 TYRO3Q06418 890 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 HS2ST1Q7LGA3 356 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 ERVK-5Q9HDB9 667 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 AGPAT5Q9NUQ2 364 aa25.34■■□□□ 1.65
HOMER3-205ENST00000542541 PPP1R3GB7ZBB8 358 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 CXCL10P02778 98 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 ITGB8P26012 769 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 HOXD13P35453 343 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 DPCR1Q3MIW9 517 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 RPUSD2Q8IZ73 545 aaKnown RBP25.33■■□□□ 1.65
HOMER3-205ENST00000542541 GOLGA5Q8TBA6 731 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 SEPT8Q92599 483 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 APBB2Q92870 758 aa25.33■■□□□ 1.65
HOMER3-205ENST00000542541 ACO2Q99798 780 aaKnown RBP25.33■■□□□ 1.65
HOMER3-205ENST00000542541 TARS2Q9BW92 718 aaKnown RBP25.33■■□□□ 1.65
HOMER3-205ENST00000542541 CGNQ9P2M7 1197 aaKnown RBP25.33■■□□□ 1.65
HOMER3-205ENST00000542541 B4GALT5O43286 388 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 TOM1L1O75674 476 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 ZSCAN20P17040 1043 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-205ENST00000542541 ARF4P18085 180 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-205ENST00000542541 PLEKHG4Q58EX7 1191 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 ATF7IP2Q5U623 682 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 SLFN12LQ6IEE8 588 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 NOTUMQ6P988 496 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 APBB1IPQ7Z5R6 666 aaPredicted RBP25.32■■□□□ 1.64
HOMER3-205ENST00000542541 FTHL17Q9BXU8 183 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 OSBPL7Q9BZF2 842 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 PIN4Q9Y237 131 aaKnown RBP25.32■■□□□ 1.64
HOMER3-205ENST00000542541 TNFSF13BQ9Y275 285 aa25.32■■□□□ 1.64
HOMER3-205ENST00000542541 A0A1B0GUA9 196 aa25.31■■□□□ 1.64
HOMER3-205ENST00000542541 PDXKO00764 312 aa25.31■■□□□ 1.64
HOMER3-205ENST00000542541 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
HOMER3-205ENST00000542541 GPNMBQ14956 572 aa25.31■■□□□ 1.64
HOMER3-205ENST00000542541 CCDC51Q96ER9 411 aa25.31■■□□□ 1.64
HOMER3-205ENST00000542541 TCHPQ9BT92 498 aa25.31■■□□□ 1.64
HOMER3-205ENST00000542541 TYW1Q9NV66 732 aaKnown RBP25.31■■□□□ 1.64
HOMER3-205ENST00000542541 N4BP3O15049 544 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 PFKMP08237 780 aa25.3■■□□□ 1.64
HOMER3-205ENST00000542541 HOXA11P31270 313 aaPredicted RBP25.3■■□□□ 1.64
HOMER3-205ENST00000542541 KLHL10Q6JEL2 608 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms