RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 TAS1R3Q7RTX0 852 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 HELQQ8TDG4 1101 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
YBX3-212ENST00000542002 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 ALG13Q9NP73 1137 aaKnown RBP10.77□□□□□ -0.69
YBX3-212ENST00000542002 HES2Q9Y543 173 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 MORC2Q9Y6X9 1032 aaPredicted RBP10.77□□□□□ -0.69
YBX3-212ENST00000542002 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.69
YBX3-212ENST00000542002 B4GALT3O60512 393 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 BRD1O95696 1058 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 ITGB1P05556 798 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 GUCY2CP25092 1073 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 CTNNB1P35222 781 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 DDIT3P35638 169 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 PBX3P40426 434 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 NAMPTP43490 491 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 PEX3P56589 373 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 DNM1Q05193 864 aaKnown RBP10.76□□□□□ -0.69
YBX3-212ENST00000542002 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
YBX3-212ENST00000542002 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 AXDND1Q5T1B0 1012 aaPredicted RBP10.76□□□□□ -0.69
YBX3-212ENST00000542002 NT5DC1Q5TFE4 455 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 KCTD17Q8N5Z5 321 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
YBX3-212ENST00000542002 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 RAD54LQ92698 747 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
YBX3-212ENST00000542002 TMEM117Q9H0C3 514 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 CXCL16Q9H2A7 254 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 MIOSQ9NXC5 875 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 PLAGL2Q9UPG8 496 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 IPPQ9Y573 584 aa10.76□□□□□ -0.69
YBX3-212ENST00000542002 ARID2Q68CP9 1835 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 SPTLC2O15270 562 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 SLC26A4O43511 780 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 ERLIN2O94905 339 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 RB1P06400 928 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 LIG1P18858 919 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 NCLP19338 710 aaKnown RBP10.75□□□□□ -0.69
YBX3-212ENST00000542002 AXLP30530 894 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 GIT2Q14161 759 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 STK38Q15208 465 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 PCBP1Q15365 356 aaKnown RBP eCLIP10.75□□□□□ -0.69
YBX3-212ENST00000542002 EEF1DP3Q658K8 133 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 SHC4Q6S5L8 630 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 ZNF280BQ86YH2 543 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 MICALL1Q8N3F8 863 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
YBX3-212ENST00000542002 DEPTORQ8TB45 409 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 SPPL3Q8TCT6 385 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 CALML4Q96GE6 196 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
YBX3-212ENST00000542002 SAMD11Q96NU1 681 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 A0A0C4DFX4 3053 aa10.75□□□□□ -0.69
YBX3-212ENST00000542002 CCDC169A6NNP5 214 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 ACKR2O00590 384 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 SLC16A4O15374 487 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PPP6R2O75170 966 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 DDHD2O94830 711 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 NPTXRO95502 500 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PRKCBP05771 671 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
YBX3-212ENST00000542002 AKAP5P24588 427 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PRPF4BQ13523 1007 aaKnown RBP10.74□□□□□ -0.69
YBX3-212ENST00000542002 GPBP1Q86WP2 473 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 TMEM161BQ8NDZ6 487 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 GSTCDQ8NEC7 633 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 IFT74Q96LB3 600 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 REEP2Q9BRK0 252 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PLVAPQ9BX97 442 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 NXF3Q9H4D5 531 aaKnown RBP10.74□□□□□ -0.69
YBX3-212ENST00000542002 PDZD7Q9H5P4 517 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PRMT7Q9NVM4 692 aaPredicted RBP10.74□□□□□ -0.69
YBX3-212ENST00000542002 LMCD1Q9NZU5 365 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 ARHGAP28Q9P2N2 729 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 RCOR1Q9UKL0 485 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PCDHA7Q9UN72 937 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 PCDHGC5Q9Y5F6 944 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 VCANP13611 3396 aa10.74□□□□□ -0.69
YBX3-212ENST00000542002 ARL5CA6NH57 179 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 MYMKA6NI61 221 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 NT5C1B-RDH14C9J2C7 533 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 K7ERI5 159 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 HOXA2O43364 376 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
YBX3-212ENST00000542002 CSPG5O95196 566 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 YEATS4O95619 227 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 SKIP12755 728 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 PLS3P13797 630 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 IRS1P35568 1242 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 RAB27AP51159 221 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 ERVFC1P60507 584 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
YBX3-212ENST00000542002 MAPK6Q16659 721 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms