RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SPATA20Q8TB22 786 aa17.28■□□□□ 0.36
VARS2-212ENST00000542001 COMTP21964 271 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 CLNS1AP54105 237 aaKnown RBP17.27■□□□□ 0.36
VARS2-212ENST00000542001 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
VARS2-212ENST00000542001 MIIPQ5JXC2 388 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 LRRC31Q6UY01 552 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
VARS2-212ENST00000542001 TRIM7Q9C029 511 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 AGPAT3Q9NRZ7 376 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 PMS2P54278 862 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.36
VARS2-212ENST00000542001 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
VARS2-212ENST00000542001 AKT3Q9Y243 479 aa17.27■□□□□ 0.36
VARS2-212ENST00000542001 BAG6P46379 1132 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 RPS6P62753 249 aaKnown RBP17.27■□□□□ 0.35
VARS2-212ENST00000542001 PPP2R5CQ13362 524 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 DGKZQ13574 1117 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 EDRF1Q3B7T1 1238 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 NLRP14Q86W24 1093 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 RFX6Q8HWS3 928 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 TSEN2Q8NCE0 465 aaKnown RBP17.27■□□□□ 0.35
VARS2-212ENST00000542001 SEPT10Q9P0V9 454 aa17.27■□□□□ 0.35
VARS2-212ENST00000542001 PPP2R5EQ16537 467 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 FAM149B1Q96BN6 582 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 SAYSD1Q9NPB0 183 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 KRT81Q14533 505 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 LONRF1Q17RB8 773 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 KRT39Q6A163 491 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.26■□□□□ 0.352e-6■■■■■ 26.8
VARS2-212ENST00000542001 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 A0A1W2PQJ5 194 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 PPP1R37O75864 691 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 RNF8O76064 485 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 TNNC2P02585 160 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 ARL1P40616 181 aaPredicted RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 AADACL2Q6P093 401 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 CREG2Q8IUH2 290 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 HSPH1Q92598 858 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 STK33Q9BYT3 514 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 EDEM3Q9BZQ6 932 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 SPAG7O75391 227 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 SCP2P22307 547 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 CA4P22748 312 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 MAN1A1P33908 653 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 PCK1P35558 622 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 MAGEA9P43362 315 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 ORC2Q13416 577 aaPredicted RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 KAT5Q92993 513 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 RILPQ96NA2 401 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 CCT8L2Q96SF2 557 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
VARS2-212ENST00000542001 NGRNQ9NPE2 291 aaKnown RBP17.26■□□□□ 0.35
VARS2-212ENST00000542001 CCND2P30279 289 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 SNRNP35Q16560 246 aaKnown RBP17.25■□□□□ 0.35
VARS2-212ENST00000542001 TPCN2Q8NHX9 752 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 RNF34Q969K3 372 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 ATG4CQ96DT6 458 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 POLR3FQ9H1D9 316 aaPredicted RBP17.25■□□□□ 0.35
VARS2-212ENST00000542001 NRBP2Q9NSY0 501 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 ZNF263O14978 683 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
VARS2-212ENST00000542001 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 FAM49AQ9H0Q0 323 aaPredicted RBP17.25■□□□□ 0.35
VARS2-212ENST00000542001 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 GMNCA6NCL1 334 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 PSAPP07602 524 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 IL1R1P14778 569 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 LSP1P33241 339 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 PPP2R2AP63151 447 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 FBXL13Q8NEE6 735 aa17.25■□□□□ 0.35
VARS2-212ENST00000542001 SGPL1O95470 568 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
VARS2-212ENST00000542001 MCUR1Q96AQ8 359 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 GOLGA8RI6L899 631 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
VARS2-212ENST00000542001 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
VARS2-212ENST00000542001 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 ANKRD20A3Q5VUR7 823 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 MMGT1Q8N4V1 131 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 CCDC110Q8TBZ0 833 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 C18orf8Q96DM3 657 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 SIK3Q9Y2K2 1263 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 FANCGO15287 622 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 HSD17B3P37058 310 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 PSMC5P62195 406 aa17.24■□□□□ 0.35
VARS2-212ENST00000542001 WDR93Q6P2C0 686 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms