RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 OPLAHO14841 1288 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 PJA2O43164 708 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 RNASEH1O60930 286 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 HSPA1AP0DMV8 641 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 HSPA1BP0DMV9 641 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 TMPRSS15P98073 1019 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 PLIN5Q00G26 463 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 PTH1RQ03431 593 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 GLRA4Q5JXX5 417 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 TMEM179Q6ZVK1 233 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 PYROXD1Q8WU10 500 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 MOV10L1Q9BXT6 1211 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 SLC13A1Q9BZW2 595 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 SLC39A10Q9ULF5 831 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 WDR97A6NE52 1622 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 IQGAP2Q13576 1575 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ZMYM6O95789 1325 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 DPEP1P16444 411 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ELF2Q15723 593 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 KLHL40Q2TBA0 621 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 POM121L1PQ3SYA9 428 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ZRANB3Q5FWF4 1079 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 FAM102AQ5T9C2 384 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 DOK6Q6PKX4 331 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 C16orf62Q7Z3J2 963 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 RNF25Q96BH1 459 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 PGBD4Q96DM1 585 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ARHGAP26Q9UNA1 814 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ASB14A6NK59 587 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 CAPN1P07384 714 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 CKBP12277 381 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 DMC1Q14565 340 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 EFHC2Q5JST6 749 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 KRT39Q6A163 491 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 DCTPP1Q9H773 170 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 MRPL47Q9HD33 250 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 CPSF2Q9P2I0 782 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 IPPQ9Y573 584 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 SAR1BQ9Y6B6 198 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 AATKQ6ZMQ8 1374 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 WBP4O75554 376 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 ACSL3O95573 720 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ENO2P09104 434 aaPredicted RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 HIST1H2AGP0C0S8 130 aaPredicted RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 HIST1H2ADP20671 130 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 KRT72Q14CN4 511 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ANKRD20A4Q4UJ75 823 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ANKRD20A8PQ5CZ79 823 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ANKRD20A2Q5SQ80 823 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ANKRD20A1Q5TYW2 823 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ZNF746Q6NUN9 644 aaPredicted RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 RFX8Q6ZV50 586 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 TDRD7Q8NHU6 1098 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 OTUB1Q96FW1 271 aaPredicted RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 HIST1H2AHQ96KK5 128 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 HIST1H2AJQ99878 128 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 H2AFJQ9BTM1 129 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 GPR63Q9BZJ6 419 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 BRD8Q9H0E9 1235 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 PLEKHA5Q9HAU0 1116 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 AKAP7Q9P0M2 348 aaPredicted RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 SPASTQ9UBP0 616 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 LAMC3Q9Y6N6 1575 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 SPAG7O75391 227 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 GAP43P17677 238 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 PRDX5P30044 214 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 HPCAP84074 193 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 DDX39BQ13838 428 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 SCG3Q8WXD2 468 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 PCDHB8Q9UN66 801 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 HYOU1Q9Y4L1 999 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 MED23Q9ULK4 1368 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 A8MX80 341 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 RASGRF2O14827 1237 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 SCAMP3O14828 347 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 TEX33O43247 280 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 RRP9O43818 475 aaKnown RBP6.7□□□□□ -1.34
DMD-228ENST00000541735 HMOX2P30519 316 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 TRPC1P48995 793 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 NR5A1Q13285 461 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 SURF1Q15526 300 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 BTN2A1Q7KYR7 527 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 DGKHQ86XP1 1220 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 NUP93Q8N1F7 819 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.7□□□□□ -1.34
DMD-228ENST00000541735 USP28Q96RU2 1077 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 TESK2Q96S53 571 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 ABCG4Q9H172 646 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 TRPV6Q9H1D0 765 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 EMILIN3Q9NT22 766 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 VTI1BQ9UEU0 232 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 NAGPAQ9UK23 515 aa6.7□□□□□ -1.34
DMD-228ENST00000541735 MYO1GB0I1T2 1018 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms