RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNF445P59923 1031 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 PTENP60484 403 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
DDX55-208ENST00000541259 GTF2BQ00403 316 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 TLE2Q04725 743 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 SNX17Q15036 470 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 PPP2R5AQ15172 486 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 CDCA2Q69YH5 1023 aaPredicted RBP10.28□□□□□ -0.76
DDX55-208ENST00000541259 TAF2Q6P1X5 1199 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 ADSSL1Q8N142 457 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 NME8Q8N427 588 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 DEPTORQ8TB45 409 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 MED15Q96RN5 788 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 OSMRQ99650 979 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 SEZ6LQ9BYH1 1024 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 ANO10Q9NW15 660 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 IQCF3P0C7M6 154 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 CAPN2P17655 700 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 PMS1P54277 932 aaKnown RBP10.27□□□□□ -0.77
DDX55-208ENST00000541259 STX17P56962 302 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 MBTD1Q05BQ5 628 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 MGAT3Q09327 533 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 FAAP100Q0VG06 881 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 TFDP1Q14186 410 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 COBLL1Q53SF7 1204 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.77
DDX55-208ENST00000541259 ZNF618Q5T7W0 954 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 KLHL10Q6JEL2 608 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 ANKRD33Q7Z3H0 272 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 RPAINQ86UA6 219 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 MYOCDQ8IZQ8 938 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 GUF1Q8N442 669 aaKnown RBP10.27□□□□□ -0.77
DDX55-208ENST00000541259 MLKLQ8NB16 471 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 TMEM40Q8WWA1 233 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 SCLT1Q96NL6 688 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 CELF4Q9BZC1 486 aaKnown RBP10.27□□□□□ -0.77
DDX55-208ENST00000541259 CCDC113Q9H0I3 377 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 ST6GALNAC4Q9H4F1 302 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 SLC24A3Q9HC58 644 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 TBX20Q9UMR3 447 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 CTNND2Q9UQB3 1225 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 CDY2AQ9Y6F7 541 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.77
DDX55-208ENST00000541259 ZMYM2Q9UBW7 1377 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TRIM49BA6NDI0 452 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TISP43B9A030 160 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 ANKRD63C9JTQ0 380 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 INO80B-WBP1J3KQ70 363 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 K7ERI5 159 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 GPR37O15354 613 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 EIF3DO15371 548 aaKnown RBP eCLIP10.26□□□□□ -0.77
DDX55-208ENST00000541259 TLR3O15455 904 aaKnown RBP10.26□□□□□ -0.77
DDX55-208ENST00000541259 B4GALT5O43286 388 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 CKBP12277 381 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 PHKA2P46019 1235 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 CRYBB1P53674 252 aaPredicted RBP10.26□□□□□ -0.77
DDX55-208ENST00000541259 POU5F1BQ06416 359 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 BMT2Q1RMZ1 405 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 ZBTB8OSQ8IWT0 167 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 NELFBQ8WX92 580 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 ACCSQ96QU6 501 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 NFKBIZQ9BYH8 718 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
DDX55-208ENST00000541259 KCTD10Q9H3F6 313 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 FZD8Q9H461 694 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 KCNG1Q9UIX4 513 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 TRPV2Q9Y5S1 764 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 UMODL1Q5DID0 1318 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 MROH7Q68CQ1 1323 aa10.26□□□□□ -0.77
DDX55-208ENST00000541259 ANK1P16157 1881 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 CITO14578 2027 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 CCDC85CA6NKD9 419 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 M0QZ92 97 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 TGFB1I1O43294 461 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 PRKCBP05771 671 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 DARSP14868 501 aaKnown RBP10.25□□□□□ -0.77
DDX55-208ENST00000541259 EFNA5P52803 228 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 CDC42EP1Q00587 391 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 STIM1Q13586 685 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 MBTPS1Q14703 1052 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 AMHR2Q16671 573 aa10.25□□□□□ -0.77
DDX55-208ENST00000541259 KNOP1Q1ED39 458 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms