RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CDK17Q00537 523 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 CAP1Q01518 475 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 ASTE1Q2TB18 679 aaPredicted RBP13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 ZBTB41Q5SVQ8 909 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 ELMO3Q96BJ8 720 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 EDEM3Q9BZQ6 932 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 SMARCAD1Q9H4L7 1026 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 EXOC7Q9UPT5 735 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 CEP350Q5VT06 3117 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 HNRNPDLO14979 420 aaKnown RBP13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 CCP110O43303 1012 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 CYP2B6P20813 491 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 CYP2C19P33261 490 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 GCLMP48507 274 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 IGBP1P78318 339 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 TSC1Q92574 1164 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 TARS2Q9BW92 718 aaKnown RBP13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 INTS2Q9H0H0 1204 aaKnown RBP13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 GJD2Q9UKL4 321 aa13.37□□□□□ -0.27
AP003559.1-201ENST00000540906 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 LRRIQ3A6PVS8 624 aaPredicted RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ADCY3O60266 1144 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 C22orf31O95567 290 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 MMP3P08254 477 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 INSRRP14616 1297 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 JAM2P57087 298 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 MYL7Q01449 175 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ARID5AQ03989 594 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 OLIG1Q8TAK6 271 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 BICD1Q96G01 975 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 LACRTQ9GZZ8 138 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 HBP1O60381 514 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ZNF865P0CJ78 1059 aaPredicted RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 KRT13P13646 458 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 GNG11P61952 73 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 OLFML2BQ68BL8 750 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 KCNN1Q92952 543 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 GPR88Q9GZN0 384 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ABHD16BQ9H3Z7 469 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
AP003559.1-201ENST00000540906 MGAMO43451 1857 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 K7ERI5 159 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 MAPK13O15264 365 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 PIGRP01833 764 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 IGHA2P01877 340 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 HOXC6P09630 235 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 GARTP22102 1010 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 LIG4P49917 911 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 KIF11P52732 1056 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 IER5Q5VY09 327 aa13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 CDCA2Q69YH5 1023 aaPredicted RBP13.35□□□□□ -0.27
AP003559.1-201ENST00000540906 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms