RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 FAM187BQ17R55 369 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 ARSHQ5FYA8 562 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 NOTUMQ6P988 496 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 AGMOQ6ZNB7 445 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 CDR2LQ86X02 465 aaPredicted RBP18.67■□□□□ 0.58
CD9-209ENST00000540891 DEPTORQ8TB45 409 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
CD9-209ENST00000540891 P2RX5Q93086 422 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 CCDC51Q96ER9 411 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 C11orf84Q9BUA3 381 aaPredicted RBP18.67■□□□□ 0.58
CD9-209ENST00000540891 C2orf40Q9H1Z8 148 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 PRMT7Q9NVM4 692 aaPredicted RBP18.67■□□□□ 0.58
CD9-209ENST00000540891 PLAGL2Q9UPG8 496 aa18.67■□□□□ 0.58
CD9-209ENST00000540891 A0A1B0GUA9 196 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 OFD1O75665 1012 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
CD9-209ENST00000540891 PEX3P56589 373 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 RAD51AP2Q09MP3 1159 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 CAMK1Q14012 370 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 ABI1Q8IZP0 508 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 KLHL23Q8NBE8 558 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 MRPL38Q96DV4 380 aaKnown RBP18.66■□□□□ 0.58
CD9-209ENST00000540891 IFT74Q96LB3 600 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 PRIMPOLQ96LW4 560 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
CD9-209ENST00000540891 TIPINQ9BVW5 301 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 USP20Q9Y2K6 914 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 IPPQ9Y573 584 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 CNTNAP2Q9UHC6 1331 aa18.66■□□□□ 0.58
CD9-209ENST00000540891 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 SFI1A8K8P3 1242 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 ACKR2O00590 384 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 ITGB1P05556 798 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 PRKCBP05771 671 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 DNAJB1P25685 340 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 NPTX2P47972 431 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 AFF1P51825 1210 aaKnown RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 NCBP1Q09161 790 aaKnown RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 MCM6Q14566 821 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 STK38Q15208 465 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 NAALADL2Q58DX5 795 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 KRI1Q8N9T8 703 aaKnown RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 COLGALT1Q8NBJ5 622 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 SPPL3Q8TCT6 385 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 RAD54LQ92698 747 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 PGBD4Q96DM1 585 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 DRC1Q96MC2 740 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 RNF39Q9H2S5 420 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 ALG13Q9NP73 1137 aaKnown RBP18.65■□□□□ 0.58
CD9-209ENST00000540891 KCND2Q9NZV8 630 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 ZDHHC9Q9Y397 364 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 HES2Q9Y543 173 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 REV3LO60673 3130 aa18.65■□□□□ 0.58
CD9-209ENST00000540891 SPTLC2O15270 562 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 YEATS4O95619 227 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
CD9-209ENST00000540891 MAPK6Q16659 721 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 SPOUT1Q5T280 376 aaKnown RBP18.64■□□□□ 0.57
CD9-209ENST00000540891 TAS1R3Q7RTX0 852 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 PDZD7Q9H5P4 517 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 C17orf75Q9HAS0 396 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 ARHGAP28Q9P2N2 729 aa18.64■□□□□ 0.57
CD9-209ENST00000540891 ATG2AQ2TAZ0 1938 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 A0A087X0B3 334 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 CCDC169A6NNP5 214 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 PPP6R2O75170 966 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 NPTXRO95502 500 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 BRD1O95696 1058 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 LAG3P18627 525 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 LIG1P18858 919 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 PBX3P40426 434 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 EFNA5P52803 228 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 DMP1Q13316 513 aaPredicted RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 PRPF4BQ13523 1007 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 DHX8Q14562 1220 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 PTPROQ16827 1216 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 NT5DC1Q5TFE4 455 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 SLC27A1Q6PCB7 646 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 GLB1LQ6UWU2 654 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.63■□□□□ 0.57
CD9-209ENST00000540891 CNNM3Q8NE01 707 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 RASSF8Q8NHQ8 419 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 RSPH1Q8WYR4 309 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 LARP4BQ92615 738 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 REEP2Q9BRK0 252 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 NTPCRQ9BSD7 190 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 MRPL9Q9BYD2 267 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 LMAN2LQ9H0V9 348 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 NXF3Q9H4D5 531 aaKnown RBP18.63■□□□□ 0.57
CD9-209ENST00000540891 RSAD1Q9HA92 442 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 AAASQ9NRG9 546 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 TBC1D13Q9NVG8 400 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
CD9-209ENST00000540891 B4GALT3O60512 393 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms