RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 DEFB128Q7Z7B8 93 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 DAW1Q8N136 415 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 TMEM40Q8WWA1 233 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 PPP1R9BQ96SB3 815 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 RUSC1Q9BVN2 902 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
ATL3-204ENST00000540699 EXOC1Q9NV70 894 aa11.68□□□□□ -0.54
ATL3-204ENST00000540699 A0A087WZ62 844 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 FGBP02675 491 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATL3-204ENST00000540699 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 EIF4BP23588 611 aaKnown RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 PRCPP42785 496 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 STK4Q13043 487 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 COASYQ13057 564 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 MAPK7Q13164 816 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 GIT2Q14161 759 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 RHPN2Q8IUC4 686 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 KSR1Q8IVT5 923 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 SEPT8Q92599 483 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 APBB2Q92870 758 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 CCDC47Q96A33 483 aaKnown RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 OSMRQ99650 979 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 FDXACB1Q9BRP7 624 aaPredicted RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 IFIH1Q9BYX4 1025 aaKnown RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 POLR3FQ9H1D9 316 aaPredicted RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 IFT122Q9HBG6 1241 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 ERVK-5Q9HDB9 667 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 GPRC5CQ9NQ84 441 aa11.67□□□□□ -0.54
ATL3-204ENST00000540699 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
ATL3-204ENST00000540699 NPHP3-ACAD11A0A0J9YXS1 232 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 EFCAB14O75071 495 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 ACTN1P12814 892 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 ZNF18P17022 549 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 CD52P31358 61 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 PPP1R2P41236 205 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 PTENP60484 403 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 CCDC173Q0VFZ6 552 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 PSMD2Q13200 908 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 CAPSQ13938 189 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 GRIN2CQ14957 1233 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
ATL3-204ENST00000540699 SRGAP1Q7Z6B7 1085 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 BSNDQ8WZ55 320 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 HPS3Q969F9 1004 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
ATL3-204ENST00000540699 C17orf75Q9HAS0 396 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
ATL3-204ENST00000540699 XIRP2A4UGR9 3374 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 GPR182O15218 404 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 RPS6KA5O75582 802 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 ADCY5O95622 1261 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 IDEP14735 1019 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 NAMPTP43490 491 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 ZNF131P52739 623 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PAK1Q13153 545 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PAK2Q13177 524 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 IKBKEQ14164 716 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 TFDP1Q14186 410 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
ATL3-204ENST00000540699 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 OTOP2Q7RTS6 562 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 RNF149Q8NC42 400 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 KCNN1Q92952 543 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 TIFAQ96CG3 184 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 DHTKD1Q96HY7 919 aaPredicted RBP11.65□□□□□ -0.54
ATL3-204ENST00000540699 DRC1Q96MC2 740 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 NLRP4Q96MN2 994 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PPP1R16BQ96T49 567 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PBX4Q9BYU1 374 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 INO80BQ9C086 356 aaPredicted RBP11.65□□□□□ -0.54
ATL3-204ENST00000540699 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 ZNF576Q9H609 170 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 PANK4Q9NVE7 773 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 CXXC1Q9P0U4 656 aaPredicted RBP11.65□□□□□ -0.54
ATL3-204ENST00000540699 ODF2LQ9ULJ1 636 aa11.65□□□□□ -0.54
ATL3-204ENST00000540699 ST3GAL5Q9UNP4 418 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms