RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 OSBPL7Q9BZF2 842 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 FAM49AQ9H0Q0 323 aaPredicted RBP11.61□□□□□ -0.55
VPS33A-204ENST00000540669 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 SEMA6BQ9H3T3 888 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
VPS33A-204ENST00000540669 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 PTPRHQ9HD43 1115 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 SLC39A2Q9NP94 309 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 KMT5AQ9NQR1 393 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 ANO10Q9NW15 660 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 TBX20Q9UMR3 447 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 TRPV2Q9Y5S1 764 aa11.61□□□□□ -0.55
VPS33A-204ENST00000540669 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 LRRIQ4A6NIV6 560 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 ACKR2O00590 384 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 PDXKO00764 312 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 TSPAN1O60635 241 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 GCNT3O95395 438 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 CCDC192P0DO97 292 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 EIF4BP23588 611 aaKnown RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 CCNE1P24864 410 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 SMTNP53814 917 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 IQCB1Q15051 598 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 KIZQ2M2Z5 673 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 FBXO47Q5MNV8 452 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 FAM228AQ86W67 206 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 MYOCDQ8IZQ8 938 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 CCDC47Q96A33 483 aaKnown RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 NLRP4Q96MN2 994 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 DUSP9Q99956 384 aaKnown RBP11.6□□□□□ -0.55
VPS33A-204ENST00000540669 IKZF4Q9H2S9 585 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 DMAC2Q9NW81 257 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 CDY2AQ9Y6F7 541 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 CEP290O15078 2479 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 UMODL1Q5DID0 1318 aa11.6□□□□□ -0.55
VPS33A-204ENST00000540669 IKBKBO14920 756 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 TLR3O15455 904 aaKnown RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 PRPF6O94906 941 aaKnown RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 CAVIN2O95810 425 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 CXCL10P02778 98 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 ADSSP30520 456 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 HOXA11P31270 313 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 MYBPC2Q14324 1141 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 DSC3Q14574 896 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 GSE1Q14687 1217 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 LPIN1Q14693 890 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 STXBP4Q6ZWJ1 553 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 C7orf61Q8IZ16 206 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 DEPTORQ8TB45 409 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 OSMRQ99650 979 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 HAPLN2Q9GZV7 340 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 ERVK-5Q9HDB9 667 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 AGPAT3Q9NRZ7 376 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 TYW1Q9NV66 732 aaKnown RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 TBC1D7Q9P0N9 293 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
VPS33A-204ENST00000540669 RWDD2AQ9UIY3 292 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 CITO14578 2027 aa11.59□□□□□ -0.55
VPS33A-204ENST00000540669 TISP43B9A030 160 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 PSMA7O14818 248 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 B4GALT5O43286 388 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 PQBP1O60828 265 aaKnown RBP11.58□□□□□ -0.56
VPS33A-204ENST00000540669 PRKCBP05771 671 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 CLTBP09497 229 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 SELPP16109 830 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 ZNF18P17022 549 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-204ENST00000540669 TMEM62Q0P6H9 643 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 PAK1Q13153 545 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 CDKAL1Q5VV42 579 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 ISM2Q6H9L7 571 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 SASS6Q6UVJ0 657 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 LRRC8DQ7L1W4 858 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 GAS2L3Q86XJ1 694 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 ZBTB8OSQ8IWT0 167 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 CCDC155Q8N6L0 562 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 ENOX1Q8TC92 643 aaKnown RBP11.58□□□□□ -0.56
VPS33A-204ENST00000540669 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
VPS33A-204ENST00000540669 P2RX5Q93086 422 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms