RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMEM8BA6NDV4 472 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 GCOM1H8Y6P7 765 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 DTNBO60941 627 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 RETP07949 1114 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 FECHP22830 423 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 CA8P35219 290 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 SCRN1Q12765 414 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 TRAF1Q13077 416 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 STK3Q13188 491 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 IL31Q6EBC2 164 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 UNQ6494/PRO21346Q6UXR6 183 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 CYP26C1Q6V0L0 522 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 LRRC55Q6ZSA7 311 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 SLC39A11Q8N1S5 342 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 LRRC43Q8N309 656 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 CELF5Q8N6W0 485 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 PHKBQ93100 1093 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 CASD1Q96PB1 797 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 RHOBTB2Q9BYZ6 727 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 FOXQ1Q9C009 403 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 CARNS1A5YM72 827 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 C3orf80F5H4A9 247 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 ADAMTS3O15072 1205 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 GPR182O15218 404 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 FIBPO43427 364 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 MGEA5O60502 916 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 N4BP1O75113 896 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 LARGE1O95461 756 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 FGFR1P11362 822 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 IFNAR1P17181 557 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 GBP2P32456 591 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 TCF7P36402 384 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 CSRP2Q16527 193 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 ME3Q16798 604 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 PFKFB3Q16875 520 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 CMASQ8NFW8 434 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 PSTPIP2Q9H939 334 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 SEMA4GQ9NTN9 838 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 PCDHA2Q9Y5H9 948 aa10.03□□□□□ -0.8
TRAPPC1-202ENST00000540486 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.8
TRAPPC1-202ENST00000540486 PIK3CDO00329 1044 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 PFKFB2O60825 505 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 LRRN2O75325 713 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 CTSAP10619 480 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 PBX3P40426 434 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ALDH7A1P49419 539 aaKnown RBP10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 LIMK1P53667 647 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 NRLP54845 237 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 KRT76Q01546 638 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 PRKCQQ04759 706 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 TMEM62Q0P6H9 643 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 TMEM266Q2M3C6 531 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 RSPO2Q6UXX9 243 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ABI1Q8IZP0 508 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 VPS52Q8N1B4 723 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 NECAB1Q8N987 351 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 SEPT1Q8WYJ6 367 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 NELL2Q99435 816 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 DDX23Q9BUQ8 820 aaKnown RBP10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ZBP1Q9H171 429 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 SMARCAD1Q9H4L7 1026 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ST3GAL5Q9UNP4 418 aa10.02□□□□□ -0.81
TRAPPC1-202ENST00000540486 ASH1LQ9NR48 2969 aaKnown RBP10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 SMIM35A0A1B0GVV1 85 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 SMCO2A6NFE2 343 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 TAF4O00268 1085 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 TM4SF5O14894 197 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 NCAM2O15394 837 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 OATP04181 439 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 C1QTNF9P0C862 333 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 INSRRP14616 1297 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 IGBP1P78318 339 aa10.01□□□□□ -0.81
TRAPPC1-202ENST00000540486 MRPS9P82933 396 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms