RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 FAN1Q9Y2M0 1017 aa22.38■■□□□ 1.17
LPCAT3-210ENST00000540090 SPDYE4A6NLX3 237 aa22.37■■□□□ 1.17
LPCAT3-210ENST00000540090 HSPA4P34932 840 aa22.37■■□□□ 1.17
LPCAT3-210ENST00000540090 MOXD1Q6UVY6 613 aa22.37■■□□□ 1.17
LPCAT3-210ENST00000540090 CMASQ8NFW8 434 aaPredicted RBP22.37■■□□□ 1.17
LPCAT3-210ENST00000540090 MRPL17Q9NRX2 175 aaKnown RBP22.37■■□□□ 1.17
LPCAT3-210ENST00000540090 M0R2N6 131 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 NRP1O14786 923 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 SSBP05455 408 aaKnown RBP eCLIP22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 HOXA11P31270 313 aaPredicted RBP22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 CCT2P78371 535 aaKnown RBP22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 CCDC105Q8IYK2 499 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 FAM193BQ96PV7 902 aaPredicted RBP22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 RTP3Q9BQQ7 232 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 NCOA5Q9HCD5 579 aaKnown RBP22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 IGSF9Q9P2J2 1179 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 COL4A3BPQ9Y5P4 624 aa22.36■■□□□ 1.17
LPCAT3-210ENST00000540090 CNTNAP2Q9UHC6 1331 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 UBXN11Q5T124 520 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 PLA2G4FQ68DD2 849 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 SRGAP1Q7Z6B7 1085 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 RHOBTB2Q9BYZ6 727 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 DCHS1Q96JQ0 3298 aa22.35■■□□□ 1.17
LPCAT3-210ENST00000540090 EML1O00423 815 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 SOD2P04179 222 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 QARSP47897 775 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 NPEPPSP55786 919 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 CYP26C1Q6V0L0 522 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 EXOC8Q8IYI6 725 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 BLIDQ8IZY5 108 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 ADSSL1Q8N142 457 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 SIX5Q8N196 739 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 DTWD2Q8NBA8 298 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 PRPF31Q8WWY3 499 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 SLC7A3Q8WY07 619 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 RPS6KC1Q96S38 1066 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 DHX33Q9H6R0 707 aaKnown RBP22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 MINDY3Q9H8M7 445 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 FBXL21Q9UKT6 434 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 SSX2IPQ9Y2D8 614 aa22.34■■□□□ 1.17
LPCAT3-210ENST00000540090 N4BP1O75113 896 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 POMCP01189 267 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 PPP2R5CQ13362 524 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 ANGPT1Q15389 498 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 ZNF579Q8NAF0 562 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 DAGLBQ8NCG7 672 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 WDR6Q9NNW5 1121 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 MAN1C1Q9NR34 630 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 WNT16Q9UBV4 365 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 DDX25Q9UHL0 483 aaKnown RBP22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 PPME1Q9Y570 386 aa22.33■■□□□ 1.17
LPCAT3-210ENST00000540090 C2CD2LO14523 706 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 DKC1O60832 514 aaKnown RBP eCLIP22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 EFEMP2O95967 443 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 URODP06132 367 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 PSMA5P28066 241 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 SSRP1Q08945 709 aaKnown RBP22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 NPY5RQ15761 445 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 GALNT17Q6IS24 598 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 TAS1R1Q7RTX1 841 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 RNF168Q8IYW5 571 aaPredicted RBP22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 CNNM3Q8NE01 707 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 PSPC1Q8WXF1 523 aaKnown RBP22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 TMEM143Q96AN5 459 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 CEP170P1Q96L14 293 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 HERC2P3Q9BVR0 1158 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 UBN1Q9NPG3 1134 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 MARCH5Q9NX47 278 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 DPP7Q9UHL4 492 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 DENND4AQ7Z401 1863 aa22.32■■□□□ 1.16
LPCAT3-210ENST00000540090 CCDC195A0A1B0GUA6 201 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 TEX28O15482 410 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 NARSO43776 548 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 DEXIO95424 95 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 P4HBP07237 508 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 ADH1AP07327 375 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 AK2P54819 239 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 LAMTOR4Q0VGL1 99 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 KIAA0319Q5VV43 1072 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 ERMP1Q7Z2K6 904 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 COLGALT2Q8IYK4 626 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 FAM177A1Q8N128 213 aaPredicted RBP22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 SMG8Q8ND04 991 aaKnown RBP22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 FAM20AQ96MK3 541 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 RXFP1Q9HBX9 757 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 WRAP73Q9P2S5 460 aaPredicted RBP22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 EPS15L1Q9UBC2 864 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 VAV3Q9UKW4 847 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 GVINP1Q7Z2Y8 2422 aa22.31■■□□□ 1.16
LPCAT3-210ENST00000540090 INPPL1O15357 1258 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 ASAP2O43150 1006 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 SLC37A4O43826 429 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 PAPLNO95428 1278 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 RFC5P40937 340 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 NONOQ15233 471 aaKnown RBP eCLIP22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 CENPQQ7L2Z9 268 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms