RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 TARS2Q9BW92 718 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 METTL14Q9HCE5 456 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 XPNPEP3Q9NQH7 507 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 CGNQ9P2M7 1197 aaKnown RBP7.55□□□□□ -1.2
CDH19-203ENST00000540086 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
CDH19-203ENST00000540086 ITIH6Q6UXX5 1313 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 PHLPP2Q6ZVD8 1323 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 RRN3P2A6NIE6 340 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 TTLL13PA6NNM8 815 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 HAS3O00219 553 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 CSDE1O75534 798 aaKnown RBP7.54□□□□□ -1.2
CDH19-203ENST00000540086 GYPCP04921 128 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 TRIM49P0CI25 452 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 TRIM49CP0CI26 452 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 TMOD1P28289 359 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 CASP14P31944 242 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 ABCD1P33897 745 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 SNRPFP62306 86 aaKnown RBP7.54□□□□□ -1.2
CDH19-203ENST00000540086 ZNF200P98182 395 aaPredicted RBP7.54□□□□□ -1.2
CDH19-203ENST00000540086 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 TFDP1Q14186 410 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 MYBPC2Q14324 1141 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 MAP3K21Q5TCX8 1036 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 NFRKBQ6P4R8 1299 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 CXCL17Q6UXB2 119 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 ZSCAN30Q86W11 494 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 CBWD2Q8IUF1 395 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 ZBTB8OSQ8IWT0 167 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 POMGNT1Q8WZA1 660 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 ERGIC2Q96RQ1 377 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 MKNK1Q9BUB5 465 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
CDH19-203ENST00000540086 UPF3AQ9H1J1 476 aaKnown RBP7.54□□□□□ -1.2
CDH19-203ENST00000540086 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 MINDY3Q9H8M7 445 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 ANKFY1Q9P2R3 1169 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 PYCARDQ9ULZ3 195 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH19-203ENST00000540086 NRCAMQ92823 1304 aa7.54□□□□□ -1.2
CDH19-203ENST00000540086 A0A087WZ62 844 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 ESPNB1AK53 854 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 AKR1B15C9JRZ8 316 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 INO80B-WBP1J3KQ70 363 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 RNF225M0QZC1 329 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 ADAMTS4O75173 837 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 GNRH1P01148 92 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 PIGRP01833 764 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 INHAP05111 366 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 PRKCBP05771 671 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 ADRB2P07550 413 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 FXR1P51114 621 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDH19-203ENST00000540086 EFNA5P52803 228 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 PTENP60484 403 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TMEM62Q0P6H9 643 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 KIAA0319LQ8IZA0 1049 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TC2NQ8N9U0 490 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 NLRP7Q8WX94 980 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 KCNN1Q92952 543 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 ZBTB45Q96K62 511 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 SCLT1Q96NL6 688 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MAP7D2Q96T17 732 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 FDXACB1Q9BRP7 624 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 FAM213AQ9BRX8 229 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 CRACR2AQ9BSW2 395 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MTG1Q9BT17 334 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 KATNAL1Q9BW62 490 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 INO80BQ9C086 356 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 C2orf40Q9H1Z8 148 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MMRN2Q9H8L6 949 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 FAM207AQ9NSI2 230 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 HDAC6Q9UBN7 1215 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 SIK3Q9Y2K2 1263 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TRIM17Q9Y577 477 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 PTCH2Q9Y6C5 1203 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 LOXHD1Q8IVV2 1947 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TTC26A0AVF1 554 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 C17orf102A2RUQ5 167 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MBLAC1A4D2B0 266 aaPredicted RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 RBAK-RBAKDNI3L0D1 243 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 EPHB6O15197 1021 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 ASAP2O43150 1006 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TREHO43280 583 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 B4GALT5O43286 388 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MSCO60682 206 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 MFAP3LO75121 409 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TPM1P09493 284 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 CYP2C9P11712 490 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 HARSP12081 509 aaKnown RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 KRT13P13646 458 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 HSPA6P17066 643 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 TRIM21P19474 475 aaKnown RBP7.53□□□□□ -1.2
CDH19-203ENST00000540086 GARTP22102 1010 aa7.53□□□□□ -1.2
CDH19-203ENST00000540086 SCP2P22307 547 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms