RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 INO80BQ9C086 356 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ZBP1Q9H171 429 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 AGO4Q9HCK5 861 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 TBC1D22BQ9NU19 505 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 NOL7Q9UMY1 257 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 MAFBQ9Y5Q3 323 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 R4GN57 208 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 E7EWF7 191 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 C22orf31O95567 290 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 C1RP00736 705 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 VTNP04004 478 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 CFHP08603 1231 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 CYP21A2P08686 494 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 SRFP11831 508 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 GBP2P32456 591 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 PBX3P40426 434 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 ATXN1P54253 815 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 ANAPC15P60006 121 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 PTPN14Q15678 1187 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 CLLU1OSQ5K130 101 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 EFCAB12Q6NXP0 572 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF598Q86UK7 904 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 DCLK2Q8N568 766 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 FAM184AQ8NB25 1140 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 SUMF1Q8NBK3 374 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 RNF169Q8NCN4 708 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 HELQQ8TDG4 1101 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 HDAC7Q8WUI4 952 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 RUFY2Q8WXA3 655 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 RIN2Q8WYP3 895 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 INTS4Q96HW7 963 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 RTKNQ9BST9 563 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 ADAMTS10Q9H324 1103 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 SENP2Q9HC62 589 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 WDR6Q9NNW5 1121 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 MRPL17Q9NRX2 175 aaKnown RBP6.71□□□□□ -1.34
CPSF7-219ENST00000539952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.71□□□□□ -1.348e-9■■■■■ 27.8
CPSF7-219ENST00000539952 EPS15L1Q9UBC2 864 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 AKT3Q9Y243 479 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 PCDHA10Q9Y5I2 948 aa6.71□□□□□ -1.34
CPSF7-219ENST00000539952 FNDC1Q4ZHG4 1894 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PLXNA4Q9HCM2 1894 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 CCDC195A0A1B0GUA6 201 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ZBTB42B2RXF5 422 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PPP1R3GB7ZBB8 358 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 SPTLC1O15269 473 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 LILRB3O75022 631 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF623O75123 536 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PSAPP07602 524 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 DARSP14868 501 aaKnown RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ATP4AP20648 1035 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PHKA2P46019 1235 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 CLCN4P51793 760 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 STARD6P59095 220 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 RNASELQ05823 741 aaKnown RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ITGB3BPQ13352 177 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 UBE2SQ16763 222 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 TMEM132AQ24JP5 1023 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 NOMO2Q5JPE7 1267 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF746Q6NUN9 644 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 DCLRE1AQ6PJP8 1040 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 LRSAM1Q6UWE0 723 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 GLB1LQ6UWU2 654 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 GAS2L3Q86XJ1 694 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 CCDC60Q8IWA6 550 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 SMAP1Q8IYB5 467 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ATRIPQ8WXE1 791 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 PGBD4Q96DM1 585 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 FAM167AQ96KS9 214 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 NELL2Q99435 816 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 TMUB1Q9BVT8 246 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 OSBPL6Q9BZF3 934 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 TBC1D17Q9HA65 648 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 LMBRD1Q9NUN5 540 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 DLGAP2Q9P1A6 1054 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 NCDNQ9UBB6 729 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 FBXO4Q9UKT5 387 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 FAN1Q9Y2M0 1017 aa6.7□□□□□ -1.34
CPSF7-219ENST00000539952 ZFP37Q9Y6Q3 630 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-219ENST00000539952 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 hCG_1984214I3L0E3 225 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms