RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CEBPZQ03701 1054 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 MAP2K5Q13163 448 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 COG2Q14746 738 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 WTAPQ15007 396 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 KRT31Q15323 416 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 EZH2Q15910 746 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CNGA2Q16280 664 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 KRT24Q2M2I5 525 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 WDR72Q3MJ13 1102 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.56□□□□□ -1.364e-12■□□□□ 10.4
SNHG1-211ENST00000539921 SLC45A4Q5BKX6 768 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 FAM209AQ5JX71 171 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TTC39AQ5SRH9 613 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SLC9C2Q5TAH2 1124 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SIGIRRQ6IA17 410 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CCSAPQ6IQ19 270 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CCDC62Q6P9F0 684 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 FRA10AC1Q70Z53 315 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SH3RF1Q7Z6J0 888 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TMEM126BQ8IUX1 230 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 FOXP4Q8IVH2 680 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SPARTQ8N0X7 666 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CLASRPQ8N2M8 674 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 FITM2Q8N6M3 262 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ATP6V0D2Q8N8Y2 350 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TNIP2Q8NFZ5 429 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 OR7G1Q8NGA0 311 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ACTRT1Q8TDG2 376 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CHPT1Q8WUD6 406 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PTCD2Q8WV60 388 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 AFG1LQ8WV93 481 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CKAP2Q8WWK9 683 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RASSF5Q8WWW0 418 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 NELFBQ8WX92 580 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 MAML1Q92585 1016 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TTC9Q92623 222 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 STMN2Q93045 179 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 BORCS5Q969J3 196 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RUNDC3BQ96NL0 473 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 DUSP9Q99956 384 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RIOK1Q9BRS2 568 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 DDX23Q9BUQ8 820 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 C2orf49Q9BVC5 232 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TLR10Q9BXR5 811 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SEZ6LQ9BYH1 1024 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 MRPS26Q9BYN8 205 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 VPS16Q9H269 839 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TMEM60Q9H2L4 133 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SLC12A5Q9H2X9 1139 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PABPC3Q9H361 631 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 USP29Q9HBJ7 922 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF304Q9HCX3 659 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TLR7Q9NYK1 1049 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PARP2Q9UGN5 583 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 KLHL3Q9UH77 587 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 STX8Q9UNK0 236 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 STK38LQ9Y2H1 464 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 IFT52Q9Y366 437 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PPME1Q9Y570 386 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TRIM17Q9Y577 477 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CLIC4Q9Y696 253 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 COMMD10Q9Y6G5 202 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 LRRC37A3O60309 1634 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PHRF1Q9P1Y6 1649 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SLIT3O75094 1523 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FRMPD4Q14CM0 1322 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PPLO60437 1756 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PNMA6EA0A0J9YXQ4 647 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FUOMA2VDF0 154 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TRIM64CA6NLI5 447 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 SYCE1LA8MT33 242 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 H0YC42 278 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 BOLA2-SMG1P6H3BVE0 249 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 HAT1O14929 419 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PFDN6O15212 129 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ADCY3O60266 1144 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 MAGEC1O60732 1142 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 CCDC22O60826 627 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FKBP6O75344 327 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TAF5LO75529 589 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TRMUO75648 421 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 DGKIO75912 1065 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FBXO21O94952 628 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PSMG1O95456 288 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ATP5BP06576 529 aaKnown RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 UBTFL1P0CB47 393 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-211ENST00000539921 C7P10643 843 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 RARGP13631 454 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 OSBPP22059 807 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 FUT4P22083 530 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 PTPREP23469 700 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 ANXA13P27216 316 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 CDC27P30260 824 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 HSD17B4P51659 736 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 RAP1GDS1P52306 607 aa6.55□□□□□ -1.36
SNHG1-211ENST00000539921 TPD52P55327 224 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms