RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NOC2LQ9Y3T9 749 aaKnown RBP16.96■□□□□ 0.3
DDB1-216ENST00000539739 NFX1Q12986 1120 aaKnown RBP16.95■□□□□ 0.3
DDB1-216ENST00000539739 MORC3Q14149 939 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 LPIN1Q14693 890 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 TMEM132AQ24JP5 1023 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 ZC2HC1CQ53FD0 456 aaPredicted RBP16.95■□□□□ 0.3
DDB1-216ENST00000539739 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 ACCSQ96QU6 501 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 CCDC113Q9H0I3 377 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 ST3GAL5Q9UNP4 418 aa16.95■□□□□ 0.3
DDB1-216ENST00000539739 UBE4BO95155 1302 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 ACKR2O00590 384 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 PPP1R37O75864 691 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 PRPF6O94906 941 aaKnown RBP16.94■□□□□ 0.3
DDB1-216ENST00000539739 CASP5P51878 434 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 PRPF4BQ13523 1007 aaKnown RBP16.94■□□□□ 0.3
DDB1-216ENST00000539739 STIM1Q13586 685 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 FAM228AQ86W67 206 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 MYOCDQ8IZQ8 938 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 SYCP3Q8IZU3 236 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 KIAA0895Q8NCT3 520 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 BICD1Q96G01 975 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 STRA6Q9BX79 667 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
DDB1-216ENST00000539739 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 IFIH1Q9BYX4 1025 aaKnown RBP16.94■□□□□ 0.3
DDB1-216ENST00000539739 TMEM206Q9H813 350 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 AGO3Q9H9G7 860 aaKnown RBP16.94■□□□□ 0.3
DDB1-216ENST00000539739 PADI3Q9ULW8 664 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 GDAQ9Y2T3 454 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 ALPK3Q96L96 1907 aa16.94■□□□□ 0.3
DDB1-216ENST00000539739 NBNO60934 754 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 FGFR4P22455 802 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 ITGB8P26012 769 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 AXLP30530 894 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 CD52P31358 61 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 PPP1R2P41236 205 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 FAM43BQ6ZT52 329 aaPredicted RBP16.93■□□□□ 0.3
DDB1-216ENST00000539739 EPM2AIP1Q7L775 607 aaPredicted RBP16.93■□□□□ 0.3
DDB1-216ENST00000539739 TAS1R3Q7RTX0 852 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 MAP4K3Q8IVH8 894 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
DDB1-216ENST00000539739 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 ZNF507Q8TCN5 953 aa16.93■□□□□ 0.3
DDB1-216ENST00000539739 CXCL10P02778 98 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 SYN1P17600 705 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 DEFB128Q7Z7B8 93 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 SCFD1Q8WVM8 642 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 SEPT8Q92599 483 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 APBB2Q92870 758 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 LBHD1Q9BQE6 289 aaPredicted RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 ERVK-5Q9HDB9 667 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 TSPAN1O60635 241 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 CAPN15O75808 1086 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 CSF2RAP15509 400 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 NLRP12P59046 1061 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.34e-6■■■■□ 19.6
DDB1-216ENST00000539739 AMHR2Q16671 573 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 PLEKHG4Q58EX7 1191 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 NOTUMQ6P988 496 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 NELFCDQ8IXH7 590 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 BADQ92934 168 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 FTHL17Q9BXU8 183 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
DDB1-216ENST00000539739 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
DDB1-216ENST00000539739 CNTNAP2Q9UHC6 1331 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 PFKMP08237 780 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 ARF4P18085 180 aaPredicted RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 BMP6P22004 513 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 PRCPP42785 496 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 RGS19P49795 217 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 LIG4P49917 911 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 FPGSQ05932 587 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 KCNA1Q09470 495 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 GPNMBQ14956 572 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 ATF7IP2Q5U623 682 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 ZPBP2Q6X784 338 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 DBF4BQ8NFT6 615 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 ACO2Q99798 780 aaKnown RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 TARS2Q9BW92 718 aaKnown RBP16.91■□□□□ 0.3
DDB1-216ENST00000539739 OSBPL7Q9BZF2 842 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 AGPAT5Q9NUQ2 364 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 DACH1Q9UI36 760 aa16.91■□□□□ 0.3
DDB1-216ENST00000539739 PSMA7O14818 248 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 N4BP3O15049 544 aa16.9■□□□□ 0.3
DDB1-216ENST00000539739 B4GALT5O43286 388 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms