RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 BMP15O95972 392 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 POU3F3P20264 500 aaPredicted RBP11.85□□□□□ -0.51
HMGA2-209ENST00000539662 PEX3P56589 373 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
HMGA2-209ENST00000539662 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 GPM6BQ13491 265 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 CAMK1Q14012 370 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 NAALADL2Q58DX5 795 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 NFKBIZQ9BYH8 718 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 CCSER1Q9C0I3 900 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 FZD8Q9H461 694 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 PCDHGC5Q9Y5F6 944 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
HMGA2-209ENST00000539662 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 ZNF623O75123 536 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 OFD1O75665 1012 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 ERLIN2O94905 339 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 ITGB1P05556 798 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 NPTX2P47972 431 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 STK38Q15208 465 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 NT5DC1Q5TFE4 455 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 MRPL10Q7Z7H8 261 aaKnown RBP11.84□□□□□ -0.51
HMGA2-209ENST00000539662 KLHL23Q8NBE8 558 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 RAD54LQ92698 747 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 CALML4Q96GE6 196 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 CDK5RAP3Q96JB5 506 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 NXF3Q9H4D5 531 aaKnown RBP11.84□□□□□ -0.51
HMGA2-209ENST00000539662 MIOSQ9NXC5 875 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 IPPQ9Y573 584 aa11.84□□□□□ -0.51
HMGA2-209ENST00000539662 A0A1B0GUA9 196 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 CCDC169A6NNP5 214 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 NT5C1B-RDH14C9J2C7 533 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 SPTLC2O15270 562 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 SLC16A4O15374 487 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 NPTXRO95502 500 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 EOMESO95936 686 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 PRKCBP05771 671 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 IRS1P35568 1242 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 NAMPTP43490 491 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
HMGA2-209ENST00000539662 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 TMEM173Q86WV6 379 aaPredicted RBP11.83□□□□□ -0.52
HMGA2-209ENST00000539662 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
HMGA2-209ENST00000539662 DEPTORQ8TB45 409 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 APOL6Q9BWW8 343 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 PDZD7Q9H5P4 517 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 PLAGL2Q9UPG8 496 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 INPP5FQ9Y2H2 1132 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 TCHHQ07283 1943 aa11.83□□□□□ -0.52
HMGA2-209ENST00000539662 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 VCANP13611 3396 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 DDHD2O94830 711 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 AKAP5P24588 427 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.523e-9■■■□□ 17.1
HMGA2-209ENST00000539662 GIT2Q14161 759 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 FAM187BQ17R55 369 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 PDILTQ8N807 584 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 RASSF8Q8NHQ8 419 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 STAMQ92783 540 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 IFT74Q96LB3 600 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 ZNF396Q96N95 335 aaPredicted RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 TBC1D13Q9NVG8 400 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 PRMT7Q9NVM4 692 aaPredicted RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 KLK14Q9P0G3 267 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 ARHGAP28Q9P2N2 729 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 MORC2Q9Y6X9 1032 aaPredicted RBP11.82□□□□□ -0.52
HMGA2-209ENST00000539662 CNTNAP2Q9UHC6 1331 aa11.82□□□□□ -0.52
HMGA2-209ENST00000539662 MYMKA6NI61 221 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 ACKR2O00590 384 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
HMGA2-209ENST00000539662 PPP6R2O75170 966 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 YEATS4O95619 227 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 POMCP01189 267 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 RB1P06400 928 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 AXLP30530 894 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 DDIT3P35638 169 aa11.81□□□□□ -0.52
HMGA2-209ENST00000539662 RAB27AP51159 221 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms