RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 PDXKO00764 312 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 PRKCBP05771 671 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 PFKMP08237 780 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 RAG1P15918 1043 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ZSCAN20P17040 1043 aaPredicted RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 CASP1P29466 404 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 CDC25BP30305 580 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 MKI67P46013 3256 aaKnown RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 LIG4P49917 911 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 LRRC63Q05C16 580 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 PRPF4BQ13523 1007 aaKnown RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 KNOP1Q1ED39 458 aaKnown RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 BMT2Q1RMZ1 405 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ANO6Q4KMQ2 910 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 USP37Q86T82 979 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 RPUSD2Q8IZ73 545 aaKnown RBP11.22□□□□□ -0.61
CLPB-210ENST00000539148 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ZNF507Q8TCN5 953 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 FTHL17Q9BXU8 183 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ADAMTS10Q9H324 1103 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 TBX20Q9UMR3 447 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 N4BP3O15049 544 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 EVI5O60447 810 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 EFCAB14O75071 495 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 GPR32O75388 356 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 LDHAP00338 332 aaKnown RBP11.21□□□□□ -0.61
CLPB-210ENST00000539148 NMT1P30419 496 aaKnown RBP11.21□□□□□ -0.61
CLPB-210ENST00000539148 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLPB-210ENST00000539148 FAAP100Q0VG06 881 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 STK4Q13043 487 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 PAK1Q13153 545 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 PAK2Q13177 524 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 DRP2Q13474 957 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 MYBPC2Q14324 1141 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 NOTUMQ6P988 496 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 UBE2Q1Q7Z7E8 422 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 MAP4K3Q8IVH8 894 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
CLPB-210ENST00000539148 FZD8Q9H461 694 aa11.21□□□□□ -0.61
CLPB-210ENST00000539148 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
CLPB-210ENST00000539148 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 IKBKBO14920 756 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 KIAA0355O15063 1070 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 CLDN3O15551 220 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 TOM1L1O75674 476 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ADCY5O95622 1261 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 TIMP1P01033 207 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 PIGRP01833 764 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 CTSHP09668 335 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ACTN1P12814 892 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 CCNE1P24864 410 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 PRCPP42785 496 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 RAB27AP51159 221 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 TMEM62Q0P6H9 643 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 LRRC26Q2I0M4 334 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 TRIM71Q2Q1W2 868 aaKnown RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 EDRF1Q3B7T1 1238 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 DCAF4L1Q3SXM0 396 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 PRPF38BQ5VTL8 546 aaKnown RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 ISM2Q6H9L7 571 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 KSR1Q8IVT5 923 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 RSPH1Q8WYR4 309 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 SEPT8Q92599 483 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 OSMRQ99650 979 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 NOC4LQ9BVI4 516 aaKnown RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 TRIM6Q9C030 488 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 CBX8Q9HC52 389 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 RWDD2AQ9UIY3 292 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 ZKSCAN5Q9Y2L8 839 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
CLPB-210ENST00000539148 CENPFP49454 3210 aa11.2□□□□□ -0.62
CLPB-210ENST00000539148 CITO14578 2027 aa11.19□□□□□ -0.62
CLPB-210ENST00000539148 CETN3O15182 167 aa11.19□□□□□ -0.62
CLPB-210ENST00000539148 NRDCO43847 1150 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms