RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CTNNBL1Q8WYA6 563 aaPredicted RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 MFSD14AQ96MC6 490 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
SMG6-203ENST00000536871 ZNF302Q9NR11 478 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 NRBP2Q9NSY0 501 aa14.72□□□□□ -0.05
SMG6-203ENST00000536871 MYH11P35749 1972 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 NCANO14594 1321 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 DDX3XO00571 662 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMG6-203ENST00000536871 CLSTN1O94985 981 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 OATP04181 439 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 NOP2P46087 812 aaKnown RBP14.71□□□□□ -0.05
SMG6-203ENST00000536871 MFAP3P55082 362 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 TCEAL1Q15170 157 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 ENOX2Q16206 610 aaKnown RBP14.71□□□□□ -0.05
SMG6-203ENST00000536871 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 NFRKBQ6P4R8 1299 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 USP50Q70EL3 339 aaPredicted RBP14.71□□□□□ -0.05
SMG6-203ENST00000536871 GPD1LQ8N335 351 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 RDH13Q8NBN7 331 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 GTF3C2Q8WUA4 911 aaPredicted RBP14.71□□□□□ -0.05
SMG6-203ENST00000536871 FAM167AQ96KS9 214 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 SYT11Q9BT88 431 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 UBXN6Q9BZV1 441 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 SPATC1LQ9H0A9 340 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 PCIF1Q9H4Z3 704 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 ABCB6Q9NP58 842 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 GPRC5CQ9NQ84 441 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
SMG6-203ENST00000536871 IGKV6D-21A0A0A0MT36 114 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 ANKRD62A6NC57 917 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 GAS2O43903 313 aaKnown RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 SEC31AO94979 1220 aaKnown RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 LDHAP00338 332 aaKnown RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 TNFRSF8P28908 595 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 PLA2G4AP47712 749 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 GPC3P51654 580 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 POLGP54098 1239 aaPredicted RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 STRN3Q13033 797 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 FASTKD5Q7L8L6 764 aaKnown RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 SLFN11Q7Z7L1 901 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 CCDC60Q8IWA6 550 aaPredicted RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 RHOT2Q8IXI1 618 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 SLC7A3Q8WY07 619 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 RFFLQ8WZ73 363 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
SMG6-203ENST00000536871 A0A0G2JMZ2 1700 aa14.7□□□□□ -0.06
SMG6-203ENST00000536871 SPDYE5A6NIY4 337 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 UNCXA6NJT0 531 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 PDE2AO00408 941 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 ZNF185O15231 689 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 NAMPTP43490 491 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 HADHBP55084 474 aaKnown RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 TNNC1P63316 161 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 PPP3CAQ08209 521 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 PPIL2Q13356 520 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 PHLDB3Q6NSJ2 640 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 TPCN2Q8NHX9 752 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 AFAP1L1Q8TED9 768 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 PARD3BQ8TEW8 1205 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 COG1Q8WTW3 980 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 U2AF1L4Q8WU68 220 aaKnown RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.69□□□□□ -0.06
SMG6-203ENST00000536871 POMGNT1Q8WZA1 660 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 GPR88Q9GZN0 384 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 IKZF4Q9H2S9 585 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 KCNH4Q9UQ05 1017 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 HNRNPDLO14979 420 aaKnown RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 DDNO94850 711 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 PIGRP01833 764 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 GZMAP12544 262 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 OSBPP22059 807 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 GCLMP48507 274 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 EMC2Q15006 297 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 GJB7Q6PEY0 223 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 LRRC57Q8N9N7 239 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 FBXL13Q8NEE6 735 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 ACTRT1Q8TDG2 376 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 AGPAT1Q99943 283 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 PACSIN1Q9BY11 444 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 TMEM117Q9H0C3 514 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 POLR3FQ9H1D9 316 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 PORCNQ9H237 461 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 AJAP1Q9UKB5 411 aaPredicted RBP14.69□□□□□ -0.06
SMG6-203ENST00000536871 AGTPBP1Q9UPW5 1226 aa14.69□□□□□ -0.06
SMG6-203ENST00000536871 SYNGAP1Q96PV0 1343 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 ZNF233A6NK53 670 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 EXTL3O43909 919 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 KIF4AO95239 1232 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 TFRCP02786 760 aaKnown RBP14.68□□□□□ -0.06
SMG6-203ENST00000536871 ADSSP30520 456 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 GALCP54803 685 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 PPP2R5EQ16537 467 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 HSP90B2PQ58FF3 399 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 C1orf220Q5T0J3 134 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 TREML2Q5T2D2 321 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms