RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 SMTNP53814 917 aa23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 RESP18Q5W5W9 173 aa23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 CMTR2Q8IYT2 770 aaKnown RBP23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 TGS1Q96RS0 853 aaKnown RBP23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 CCDC113Q9H0I3 377 aa23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
LPCAT3-204ENST00000536797 PHLPP2Q6ZVD8 1323 aa23.14■■□□□ 1.3
LPCAT3-204ENST00000536797 FNDC1Q4ZHG4 1894 aaPredicted RBP23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 K7ERI5 159 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 TBCAO75347 108 aaKnown RBP23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 PRPF4BQ13523 1007 aaKnown RBP23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 GIT2Q14161 759 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 GRIN2CQ14957 1233 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 ADALQ6DHV7 355 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 ZNF598Q86UK7 904 aaKnown RBP23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 SPIRE2Q8WWL2 714 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 CUEDC2Q9H467 287 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 CERS4Q9HA82 394 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 ARHGAP28Q9P2N2 729 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 CHD9Q3L8U1 2897 aa23.14■■□□□ 1.29
LPCAT3-204ENST00000536797 CNTNAP2Q9UHC6 1331 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 ACKR2O00590 384 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 FGFR1P11362 822 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 GATMP50440 423 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 TMEM132AQ24JP5 1023 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 PAN2Q504Q3 1202 aaKnown RBP23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 UBXN11Q5T124 520 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 ABI1Q8IZP0 508 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 IQUBQ8NA54 791 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 DHX58Q96C10 678 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 NTPCRQ9BSD7 190 aaKnown RBP23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 ZHX3Q9H4I2 956 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 TMEM134Q9H6X4 195 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 PARVGQ9HBI0 331 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 PCDHB2Q9Y5E7 798 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 NLRC5Q86WI3 1866 aa23.13■■□□□ 1.29
LPCAT3-204ENST00000536797 A0A1B0GUA9 196 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 TBKBP1A7MCY6 615 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 SLC16A4O15374 487 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 ZNF623O75123 536 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 ATF7P17544 494 aaPredicted RBP23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 ERVK-21P61565 698 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 E2F4Q16254 413 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 RALGAPA2Q2PPJ7 1873 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 SLC27A1Q6PCB7 646 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 DYMQ7RTS9 669 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 MYCT1Q8N699 235 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 CNNM3Q8NE01 707 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 ARNTL2Q8WYA1 636 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 DDX12PQ92771 950 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 PGBD4Q96DM1 585 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 GUCD1Q96NT3 240 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 SAMD11Q96NU1 681 aa23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 PYM1Q9BRP8 204 aaKnown RBP23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 TRIM6Q9C030 488 aaPredicted RBP23.12■■□□□ 1.29
LPCAT3-204ENST00000536797 MYMKA6NI61 221 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 H0YCG3 227 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 ZNF131P52739 623 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 SPRED2Q7Z698 418 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 CDX2Q99626 313 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 C17orf80Q9BSJ5 609 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 TMEM117Q9H0C3 514 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 TNMDQ9H2S6 317 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 PRDM12Q9H4Q4 367 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 MTUS1Q9ULD2 1270 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 RWDD3Q9Y3V2 267 aa23.11■■□□□ 1.29
LPCAT3-204ENST00000536797 N4BP3O15049 544 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 POLR2DO15514 142 aaKnown RBP23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 CMA1P23946 247 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 LPPQ93052 612 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 EIF2AQ9BY44 585 aaKnown RBP23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 LRRC27Q9C0I9 530 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 GDPD2Q9HCC8 539 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 RNF19AQ9NV58 838 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 KCNH3Q9ULD8 1083 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 CHD7Q9P2D1 2997 aa23.1■■□□□ 1.29
LPCAT3-204ENST00000536797 NCKAP1LP55160 1127 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 STRN3Q13033 797 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 LONRF3Q496Y0 759 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 MRPL10Q7Z7H8 261 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 CDR2LQ86X02 465 aaPredicted RBP23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 TMEM161BQ8NDZ6 487 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 HELQQ8TDG4 1101 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 RSPH1Q8WYR4 309 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 CASD1Q96PB1 797 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 GAS2L1Q99501 681 aaPredicted RBP23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 ADPGKQ9BRR6 497 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 MAGEF1Q9HAY2 307 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 IPPQ9Y573 584 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 MRPL42Q9Y6G3 142 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 MYO9BQ13459 2157 aa23.09■■□□□ 1.29
LPCAT3-204ENST00000536797 KIAA1671Q9BY89 1806 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 TTLL13PA6NNM8 815 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 TRAK2O60296 914 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 NPTXRO95502 500 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 EDN1P05305 212 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 AMPD3Q01432 767 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 CLLU1OSQ5K130 101 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 TMEM192Q8IY95 271 aa23.08■■□□□ 1.29
LPCAT3-204ENST00000536797 HACE1Q8IYU2 909 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms