RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NOTUMQ6P988 496 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 FIBCD1Q8N539 461 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 PDILTQ8N807 584 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 RNF169Q8NCN4 708 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 SPIRE2Q8WWL2 714 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 ARNTL2Q8WYA1 636 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 PRIMPOLQ96LW4 560 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 C17orf80Q9BSJ5 609 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 ARHGAP28Q9P2N2 729 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 ODF2LQ9ULJ1 636 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 PCDHB2Q9Y5E7 798 aa25.08■■□□□ 1.61
SFSWAP-204ENST00000535399 TTLL13PA6NNM8 815 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 EDN1P05305 212 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 PRKCBP05771 671 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 RAB27AP51159 221 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 PAN2Q504Q3 1202 aaKnown RBP25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 RESP18Q5W5W9 173 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 MYLIPQ8WY64 445 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 SPATA32Q96LK8 384 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 NTPCRQ9BSD7 190 aaKnown RBP25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 KMT5AQ9NQR1 393 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 CNTNAP2Q9UHC6 1331 aa25.07■■□□□ 1.6
SFSWAP-204ENST00000535399 A0A1B0GUA9 196 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 TBKBP1A7MCY6 615 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 ACKR2O00590 384 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 ANP32AP39687 249 aaKnown RBP25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 ZNF131P52739 623 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 E2F4Q16254 413 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 CLLU1OSQ5K130 101 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 SV2BQ7L1I2 683 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 MRPL10Q7Z7H8 261 aaKnown RBP25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 CLP1Q92989 425 aaKnown RBP25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 CASD1Q96PB1 797 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 EIF2AQ9BY44 585 aaKnown RBP25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 TMEM117Q9H0C3 514 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 TMEM134Q9H6X4 195 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 MTUS1Q9ULD2 1270 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 USP20Q9Y2K6 914 aa25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 MRPL42Q9Y6G3 142 aaKnown RBP25.06■■□□□ 1.6
SFSWAP-204ENST00000535399 MYMKA6NI61 221 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 RFXAPO00287 272 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 SLC16A4O15374 487 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 HOXA2O43364 376 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 LIG1P18858 919 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 TAS1R3Q7RTX0 852 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 LPPQ93052 612 aa25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 SCAND2PQ9GZW5 306 aaPredicted RBP25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 RBM19Q9Y4C8 960 aaKnown RBP25.05■■□□□ 1.6
SFSWAP-204ENST00000535399 MEIS3P2A8K0S8 358 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 K7ERI5 159 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 FAM13AO94988 1023 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 KRT18P05783 430 aaKnown RBP25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 PRPF4BQ13523 1007 aaKnown RBP25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 ADGRE1Q14246 886 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 EPC2Q52LR7 807 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 NT5DC1Q5TFE4 455 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 CDR2LQ86X02 465 aaPredicted RBP25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 TMEM192Q8IY95 271 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 SMG8Q8ND04 991 aaKnown RBP25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 TMEM161BQ8NDZ6 487 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 SAMD11Q96NU1 681 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 LARSQ9P2J5 1176 aaKnown RBP25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 KCNG1Q9UIX4 513 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 PHLPP2Q6ZVD8 1323 aa25.04■■□□□ 1.6
SFSWAP-204ENST00000535399 LONRF3Q496Y0 759 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 AGMOQ6ZNB7 445 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 HELQQ8TDG4 1101 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 DDX12PQ92771 950 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 DHX58Q96C10 678 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 PGBD4Q96DM1 585 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 PDZD7Q9H5P4 517 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 PARVGQ9HBI0 331 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 FAM13BQ9NYF5 915 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 CIZ1Q9ULV3 898 aaPredicted RBP25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 IPPQ9Y573 584 aa25.03■■□□□ 1.6
SFSWAP-204ENST00000535399 LPXNO60711 386 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 TBCAO75347 108 aaKnown RBP25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 BMPR1AP36894 532 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 SMTNP53814 917 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 ADALQ6DHV7 355 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 SLC27A1Q6PCB7 646 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 LRRC55Q6ZSA7 311 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 DYMQ7RTS9 669 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 ABI1Q8IZP0 508 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 MYCT1Q8N699 235 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 IQUBQ8NA54 791 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 CNNM3Q8NE01 707 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 FBXO22Q8NEZ5 403 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 KCNN1Q92952 543 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 DNAJC19Q96DA6 116 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 CUEDC2Q9H467 287 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 GDPD2Q9HCC8 539 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 HCSTQ9UBK5 93 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 STXBP5LQ9Y2K9 1186 aa25.02■■□□□ 1.6
SFSWAP-204ENST00000535399 MYO9BQ13459 2157 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 N4BP3O15049 544 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 POLR2DO15514 142 aaKnown RBP25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 OFD1O75665 1012 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 NPTXRO95502 500 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 MAPTP10636 758 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms