RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 COL4A4P53420 1690 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 KTN1Q86UP2 1357 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 TAF4O00268 1085 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 KALRNO60229 2985 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 KATNA1O75449 491 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 WDHD1O75717 1129 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 F2P00734 622 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 SOD2P04179 222 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 CYP19A1P11511 503 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 FOSL1P15407 271 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 RPL10P27635 214 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 HOXA10P31260 410 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 MECP2P51608 486 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 EPHB4P54760 987 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 DSG1Q02413 1049 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 TMEM177Q53S58 311 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 OVCH1Q7RTY7 1134 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 RAVER1Q8IY67 606 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 OR2W6PQ8NHA6 318 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 CEP89Q96ST8 783 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 ALG1Q9BT22 464 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 CELF4Q9BZC1 486 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 SLC5A4Q9NY91 659 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 CHPF2Q9P2E5 772 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 OGDHLQ9ULD0 1010 aa5.85□□□□□ -1.47
ECHDC1-223ENST00000534442 GAKO14976 1311 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 CCL15-CCL14A0A0B4J2E2 113 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 BRINP1O60477 761 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 PPP1R11O60927 126 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 GDF11O95390 407 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 IL9P15248 144 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 ENDOUP21128 410 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 BCL6P41182 706 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 SCNN1BP51168 640 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 CCL15Q16663 113 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 RNF219Q5W0B1 726 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 MCTP2Q6DN12 878 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 CYP2R1Q6VVX0 501 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 NLRP10Q86W26 655 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 IFNL2Q8IZJ0 200 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 NAT16Q8N8M0 369 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 SUPT20HQ8NEM7 779 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 USP7Q93009 1102 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 TTC1Q99614 292 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 G6PC3Q9BUM1 346 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 ASPSCR1Q9BZE9 553 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 TRIM8Q9BZR9 551 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 CPA4Q9UI42 421 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 IGSF10Q6WRI0 2623 aa5.84□□□□□ -1.47
ECHDC1-223ENST00000534442 FBN2P35556 2912 aa5.84□□□□□ -1.48
ECHDC1-223ENST00000534442 BRWD1Q9NSI6 2320 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 SPTAN1Q13813 2472 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 UBR5O95071 2799 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 C2CD3Q4AC94 2353 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 TMEM221A6NGB7 291 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 ERVV-2B6SEH9 535 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 M0R296 226 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 ZEB2O60315 1214 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 PROCP04070 461 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 APPP05067 770 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 PYGMP11217 842 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 GRK2P25098 689 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 GRK3P35626 688 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 ADCYAP1R1P41586 468 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 FLT3LGP49771 235 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 DNM2P50570 870 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 PRKCQQ04759 706 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 LSAMPQ13449 338 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 MTMR1Q13613 665 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 SOWAHCQ53LP3 525 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 FBXW5Q969U6 566 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 RUNDC1Q96C34 613 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 HRASLS5Q96KN8 279 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 FCRL2Q96LA5 508 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 RTFDC1Q9BY42 306 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 CCDC8Q9H0W5 538 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 ANKFY1Q9P2R3 1169 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 B4GALT6Q9UBX8 382 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 EBF1Q9UH73 591 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 MTCH2Q9Y6C9 303 aa5.83□□□□□ -1.48
ECHDC1-223ENST00000534442 A0A1W2PP64 1363 aa5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 FAM47E-STBD1D6RA91 191 aa5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 DYRK3O43781 588 aa5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 MYO1BO43795 1136 aa5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 ALDH1L1O75891 902 aa5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 ATP2A2P16615 1042 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-223ENST00000534442 CD96P40200 585 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms