RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 SNW1Q13573 536 aaKnown RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 NFXL1Q6ZNB6 911 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 GET4Q7L5D6 327 aaPredicted RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 STAMQ92783 540 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 FGF14Q92915 247 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 CEP89Q96ST8 783 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 RTKNQ9BST9 563 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 SPATA6Q9NWH7 488 aaPredicted RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 FBXO4Q9UKT5 387 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 CEP131Q9UPN4 1083 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 F5P12259 2224 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 A0A087WZ62 844 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
SVIP-205ENST00000533774 KANSL1LA0AUZ9 987 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 PRR5-ARHGAP8B1AHC4 643 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 MAP3K13O43283 966 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 ZNF623O75123 536 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 SOD2P04179 222 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 OATP04181 439 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 PSAPP07602 524 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 CD72P21854 359 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 SDHBP21912 280 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 ADCY7P51828 1080 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 ARHGAP8P85298 464 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 FUT2Q10981 343 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
SVIP-205ENST00000533774 JAKMIP3Q5VZ66 844 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 TSSK4Q6SA08 328 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 CYP26C1Q6V0L0 522 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 RNF168Q8IYW5 571 aaPredicted RBP13.88□□□□□ -0.19
SVIP-205ENST00000533774 FANCBQ8NB91 859 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 FDXACB1Q9BRP7 624 aaPredicted RBP13.88□□□□□ -0.19
SVIP-205ENST00000533774 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 HERC2P3Q9BVR0 1158 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 PIN4Q9Y237 131 aaKnown RBP13.88□□□□□ -0.19
SVIP-205ENST00000533774 PCDHGA2Q9Y5H1 932 aa13.88□□□□□ -0.19
SVIP-205ENST00000533774 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 LAMTOR5O43504 91 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 GLUD1P00367 558 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 CYP3A4P08684 503 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 CHMLP26374 656 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 PRKCEQ02156 737 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 LMNB2Q03252 620 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 PALB2Q86YC2 1186 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
SVIP-205ENST00000533774 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 GPR161Q8N6U8 529 aaKnown RBP13.87□□□□□ -0.19
SVIP-205ENST00000533774 ATRIPQ8WXE1 791 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 B3GALT6Q96L58 329 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 SH2D3AQ9BRG2 576 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
SVIP-205ENST00000533774 RXFP1Q9HBX9 757 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 TBC1D22BQ9NU19 505 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 USP18Q9UMW8 372 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 VWA8A3KMH1 1905 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
SVIP-205ENST00000533774 CARNS1A5YM72 827 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 EDIL3O43854 480 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 STBD1O95210 358 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 POMCP01189 267 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 ALDH2P05091 517 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 URODP06132 367 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 ADH1AP07327 375 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 LIFRP42702 1097 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 NTHL1P78549 312 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 AP3B2Q13367 1082 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 UBXN2BQ14CS0 331 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
SVIP-205ENST00000533774 PPM1JQ5JR12 505 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 RSPH1Q8WYR4 309 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 LENG9Q96B70 501 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 MTA3Q9BTC8 594 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 BCO2Q9BYV7 579 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 ZSCAN32Q9NX65 697 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
SVIP-205ENST00000533774 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 PRG3Q9Y2Y8 225 aaPredicted RBP13.86□□□□□ -0.19
SVIP-205ENST00000533774 PCDHB2Q9Y5E7 798 aa13.86□□□□□ -0.19
SVIP-205ENST00000533774 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.86□□□□□ -0.19
SVIP-205ENST00000533774 IGKV6-21A0A0C4DH24 114 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms