RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 RPN1P04843 607 aaKnown RBP24■■□□□ 1.43
VPS51-212ENST00000533656 EHHADHQ08426 723 aa24■■□□□ 1.43
VPS51-212ENST00000533656 PSMD2Q13200 908 aa24■■□□□ 1.43
VPS51-212ENST00000533656 KCNB1Q14721 858 aa24■■□□□ 1.43
VPS51-212ENST00000533656 RNPC3Q96LT9 517 aaKnown RBP24■■□□□ 1.43
VPS51-212ENST00000533656 FIZ1Q96SL8 496 aa24■■□□□ 1.43
VPS51-212ENST00000533656 GTPBP4Q9BZE4 634 aaKnown RBP24■■□□□ 1.43
VPS51-212ENST00000533656 CCDC113Q9H0I3 377 aa24■■□□□ 1.43
VPS51-212ENST00000533656 FZD8Q9H461 694 aa24■■□□□ 1.43
VPS51-212ENST00000533656 MINDY3Q9H8M7 445 aa24■■□□□ 1.43
VPS51-212ENST00000533656 MRPL44Q9H9J2 332 aaKnown RBP24■■□□□ 1.43
VPS51-212ENST00000533656 CHST12Q9NRB3 414 aa24■■□□□ 1.43
VPS51-212ENST00000533656 ST3GAL5Q9UNP4 418 aa24■■□□□ 1.43
VPS51-212ENST00000533656 GBF1Q92538 1859 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 DENND3A2RUS2 1198 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 KLRC4O43908 158 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 BAIAP3O94812 1187 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 PRKCBP05771 671 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 PRR29P0C7W0 189 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 CASP1P29466 404 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 NFX1Q12986 1120 aaKnown RBP23.99■■□□□ 1.43
VPS51-212ENST00000533656 STRN3Q13033 797 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 FAM26FQ5R3K3 315 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 HAUS6Q7Z4H7 955 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 DBF4BQ8NFT6 615 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 GSDMAQ96QA5 445 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 KIFC3Q9BVG8 833 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 AGPAT5Q9NUQ2 364 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 PCDHB13Q9Y5F0 798 aa23.99■■□□□ 1.43
VPS51-212ENST00000533656 SIP14410 1827 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 ABHD14A-ACY1A0A1B0GW23 586 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 ACKR2O00590 384 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 GTF2BQ00403 316 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 PNOCQ13519 176 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 IKBKEQ14164 716 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 ZNF697Q5TEC3 545 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 ZNF720Q7Z2F6 126 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 SPATA20Q8TB22 786 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 GPT2Q8TD30 523 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 SMARCE1Q969G3 411 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 VWCEQ96DN2 955 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 CCDC51Q96ER9 411 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 TTYH1Q9H313 450 aaPredicted RBP23.98■■□□□ 1.43
VPS51-212ENST00000533656 CLSTN2Q9H4D0 955 aa23.98■■□□□ 1.43
VPS51-212ENST00000533656 CSDE1O75534 798 aaKnown RBP23.97■■□□□ 1.43
VPS51-212ENST00000533656 RHOBTB3O94955 611 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 FGBP02675 491 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 AMHR2Q16671 573 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 KMT5BQ4FZB7 885 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 OSBPL7Q9BZF2 842 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 NUP62CLQ9H1M0 184 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 MTIF3Q9H2K0 278 aaKnown RBP23.97■■□□□ 1.43
VPS51-212ENST00000533656 CNTNAP2Q9UHC6 1331 aa23.97■■□□□ 1.43
VPS51-212ENST00000533656 UBE4BO95155 1302 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 EIF3DO15371 548 aaKnown RBP eCLIP23.96■■□□□ 1.43
VPS51-212ENST00000533656 TSPAN1O60635 241 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 PPP1R37O75864 691 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 ZSCAN20P17040 1043 aaPredicted RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 NMT1P30419 496 aaKnown RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 SMAD3P84022 425 aaKnown RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 PRPF4BQ13523 1007 aaKnown RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 NOTUMQ6P988 496 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 C16orf59Q7L2K0 433 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.96■■□□□ 1.436e-6■■□□□ 12
VPS51-212ENST00000533656 STRA6Q9BX79 667 aa23.96■■□□□ 1.43
VPS51-212ENST00000533656 MRPL4Q9BYD3 311 aaKnown RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 RNF216Q9NWF9 866 aaPredicted RBP23.96■■□□□ 1.43
VPS51-212ENST00000533656 GCNT3O95395 438 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 ACRP10323 421 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 FGFR4P22455 802 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 TMEM240Q5SV17 173 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 NT5DC1Q5TFE4 455 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 MAP4K3Q8IVH8 894 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 TRAIPQ9BWF2 469 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 TSPYL2Q9H2G4 693 aaPredicted RBP23.95■■□□□ 1.42
VPS51-212ENST00000533656 C1orf112Q9NSG2 853 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 TBX20Q9UMR3 447 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 EXOC7Q9UPT5 735 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 PIN4Q9Y237 131 aaKnown RBP23.95■■□□□ 1.42
VPS51-212ENST00000533656 PCDHA5Q9Y5H7 936 aa23.95■■□□□ 1.42
VPS51-212ENST00000533656 CHD7Q9P2D1 2997 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 N4BP3O15049 544 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 KIF20AO95235 890 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 DSC3Q14574 896 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 L1TD1Q5T7N2 865 aaKnown RBP23.94■■□□□ 1.42
VPS51-212ENST00000533656 ZPBP2Q6X784 338 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 TAS1R3Q7RTX0 852 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 APBB1IPQ7Z5R6 666 aaPredicted RBP23.94■■□□□ 1.42
VPS51-212ENST00000533656 HERVK_113Q902F9 699 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 CDX2Q99626 313 aaPredicted RBP23.94■■□□□ 1.42
VPS51-212ENST00000533656 TMX1Q9H3N1 280 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 SEMA6BQ9H3T3 888 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 TMEM206Q9H813 350 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 SCN5AQ14524 2016 aa23.94■■□□□ 1.42
VPS51-212ENST00000533656 MYH11P35749 1972 aa23.93■■□□□ 1.42
VPS51-212ENST00000533656 PIGRP01833 764 aa23.93■■□□□ 1.42
VPS51-212ENST00000533656 ARF4P18085 180 aaPredicted RBP23.93■■□□□ 1.42
VPS51-212ENST00000533656 SARSP49591 514 aaKnown RBP23.93■■□□□ 1.42
VPS51-212ENST00000533656 TMEM132AQ24JP5 1023 aa23.93■■□□□ 1.42
VPS51-212ENST00000533656 ZNF365Q70YC5 407 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms