RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 IFNB1P01574 187 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 TKTL1P51854 596 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 CASP7P55210 303 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 KCNC4Q03721 635 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 DMPKQ09013 629 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 KIAA1211LQ6NV74 962 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 BRICD5Q6PL45 260 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 KIF6Q6ZMV9 814 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 NUP54Q7Z3B4 507 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 ZNF589Q86UQ0 364 aaPredicted RBP7.4□□□□□ -1.22
BDNF-217ENST00000533131 GALNT12Q8IXK2 581 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 PCYOX1LQ8NBM8 494 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 USP13Q92995 863 aaPredicted RBP7.4□□□□□ -1.22
BDNF-217ENST00000533131 C8orf76Q96K31 380 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 AK8Q96MA6 479 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 ZNF277Q9NRM2 450 aaPredicted RBP7.4□□□□□ -1.22
BDNF-217ENST00000533131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.4□□□□□ -1.22
BDNF-217ENST00000533131 TAF6LQ9Y6J9 622 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 ITIH6Q6UXX5 1313 aa7.4□□□□□ -1.22
BDNF-217ENST00000533131 TET3O43151 1660 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 SOD2P04179 222 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 DHRS4L1P0CG22 281 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 IRX1P78414 480 aaPredicted RBP7.4□□□□□ -1.23
BDNF-217ENST00000533131 TNIP1Q15025 636 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 SHROOM1Q2M3G4 852 aaPredicted RBP7.4□□□□□ -1.23
BDNF-217ENST00000533131 TEX35Q5T0J7 233 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 SYT10Q6XYQ8 523 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 FGD2Q7Z6J4 655 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 TAGAPQ8N103 731 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 ZNF619Q8N2I2 560 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 AGR3Q8TD06 166 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 LSM14BQ9BX40 385 aaKnown RBP7.4□□□□□ -1.23
BDNF-217ENST00000533131 BRMS1Q9HCU9 246 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 HOMER3Q9NSC5 361 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 NPHP3Q7Z494 1330 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 FLT4P35916 1363 aa7.4□□□□□ -1.23
BDNF-217ENST00000533131 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 KLHL33A6NCF5 533 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 GOLGA8BA8MQT2 603 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 INO80B-WBP1J3KQ70 363 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 AP3B1O00203 1094 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 PROM1O43490 865 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ZNF75DP51815 510 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ATN1P54259 1190 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 BLMHQ13867 455 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 COG2Q14746 738 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 UAP1L1Q3KQV9 507 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 KLHDC7AQ5VTJ3 777 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 PPP1R21Q6ZMI0 780 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ILDR1Q86SU0 546 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 MIER2Q8N344 545 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 CCDC148Q8NFR7 591 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ANO10Q9NW15 660 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 IFNKQ9P0W0 207 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 DNAI1Q9UI46 699 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 NCOA3Q9Y6Q9 1424 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 IGFBP4P22692 258 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 TLX1P31314 330 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 CABP4P57796 275 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 DTHD1Q6ZMT9 781 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 OR2C3Q8N628 320 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 DEPTORQ8TB45 409 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 SLC35G2Q8TBE7 412 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 RAPGEF5Q92565 580 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 NLRP3Q96P20 1036 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 IQGAP1P46940 1657 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 SPHKAPQ2M3C7 1700 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 KIF1BO60333 1816 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 C9IYK1 514 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 LPOP22079 712 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 CPT1AP50416 773 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 SNW1Q13573 536 aaKnown RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 DBN1Q16643 649 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 AKNAD1Q5T1N1 836 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 CBARPQ8N350 705 aaPredicted RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 SRBD1Q8N5C6 995 aaKnown RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 FBXO41Q8TF61 875 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 CACTINQ8WUQ7 758 aaKnown RBP7.39□□□□□ -1.23
BDNF-217ENST00000533131 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 SYNCQ9H7C4 482 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 C1orf112Q9NSG2 853 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 ANAPC5Q9UJX4 755 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 NRXN3Q9Y4C0 1643 aa7.39□□□□□ -1.23
BDNF-217ENST00000533131 POM121BA6NF01 834 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 PGPEP1LA6NFU8 196 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 A2ML1A8K2U0 1454 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 PCNAP12004 261 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 GPTP24298 496 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 EIF4A1P60842 406 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 GOLGA8FQ08AF8 430 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 GOLGA8DPQ0D2H9 430 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 STX1AQ16623 288 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 DCAF17Q5H9S7 520 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 ZSCAN25Q6NSZ9 544 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms