RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PUF60Q9UHX1 559 aaKnown RBP33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 INPP5FQ9Y2H2 1132 aa33.56■■■□□ 2.96
SSSCA1-207ENST00000533115 H3BQ06 376 aaPredicted RBP33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 TNFRSF10AO00220 468 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 NCLP19338 710 aaKnown RBP33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 CDC25AP30304 524 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 ERVFC1P60507 584 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 NECAB3Q96P71 396 aaPredicted RBP33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 EIF2AQ9BY44 585 aaKnown RBP33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 CSRNP2Q9H175 543 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 TBC1D13Q9NVG8 400 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 PCDHGC5Q9Y5F6 944 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 MUC3AQ02505 3323 aa33.55■■■□□ 2.96
SSSCA1-207ENST00000533115 CNTNAP2Q9UHC6 1331 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 ARF4P18085 180 aaPredicted RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 ALDH7A1P49419 539 aaKnown RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 BCAR1P56945 870 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 KRT17Q04695 432 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 CDCA2Q69YH5 1023 aaPredicted RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 PDE12Q6L8Q7 609 aaKnown RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 BRAPQ7Z569 592 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 SLC39A11Q8N1S5 342 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 SMG8Q8ND04 991 aaKnown RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 MMTAG2Q9BU76 263 aaKnown RBP33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 RSAD1Q9HA92 442 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 DNM3Q9UQ16 869 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 GTF3C3Q9Y5Q9 886 aa33.54■■■□□ 2.96
SSSCA1-207ENST00000533115 NCOR1O75376 2440 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 FSCN2O14926 492 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 B4GALT5O43286 388 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 PDCP20941 246 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 LTBRP36941 435 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 ARL6IP4Q66PJ3 421 aaKnown RBP33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 ZBTB8OSQ8IWT0 167 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 BSNDQ8WZ55 320 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 IPPQ9Y573 584 aa33.53■■■□□ 2.96
SSSCA1-207ENST00000533115 E9PMD0 336 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 ZC3H11AO75152 810 aaKnown RBP eCLIP33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 EYA4O95677 639 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 NRIP1P48552 1158 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 RNASELQ05823 741 aaKnown RBP33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 PUS10Q3MIT2 529 aaKnown RBP33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 URGCPQ8TCY9 931 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 C2orf40Q9H1Z8 148 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 NRDE2Q9H7Z3 1164 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 UBN1Q9NPG3 1134 aa33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 PRMT7Q9NVM4 692 aaPredicted RBP33.52■■■□□ 2.96
SSSCA1-207ENST00000533115 VPS37CA5D8V6 355 aaPredicted RBP33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 VWA3AA6NCI4 1184 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 LINC01565O15544 149 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 ITGA4P13612 1032 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 ADAM15Q13444 863 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 PTCRAQ6ISU1 281 aaPredicted RBP33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 PPP4R3CPQ6ZMV5 832 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 RBM23Q86U06 439 aaKnown RBP33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 PRIMPOLQ96LW4 560 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 FZD8Q9H461 694 aa33.51■■■□□ 2.95
SSSCA1-207ENST00000533115 CARNS1A5YM72 827 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 NT5C1B-RDH14C9J2C7 533 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 NAMPTP43490 491 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 PPP2R5AQ15172 486 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 EFHBQ8N7U6 833 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 KIFAP3Q92845 792 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 INTS4Q96HW7 963 aaKnown RBP33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 TRIM6Q9C030 488 aaPredicted RBP33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 TLE6Q9H808 572 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 POLD4Q9HCU8 107 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 KANSL3Q9P2N6 904 aa33.5■■■□□ 2.95
SSSCA1-207ENST00000533115 BDP1A6H8Y1 2624 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 A0A1B0GUA9 196 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 DLX2Q07687 328 aaPredicted RBP33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 FAM187BQ17R55 369 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 SLC27A1Q6PCB7 646 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 DEPTORQ8TB45 409 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 IFT74Q96LB3 600 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 TCF25Q9BQ70 676 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 GBP3Q9H0R5 595 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 RNF39Q9H2S5 420 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 NGRNQ9NPE2 291 aaKnown RBP33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 ENTPD7Q9NQZ7 604 aa33.49■■■□□ 2.95
SSSCA1-207ENST00000533115 GRXCR2A6NFK2 248 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 AFF1P51825 1210 aaKnown RBP33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 ZRSR1Q15695 479 aaKnown RBP33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 HYIQ5T013 277 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 PLPP4Q5VZY2 271 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 KCNK18Q7Z418 384 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 CDR2LQ86X02 465 aaPredicted RBP33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 ZNF280BQ86YH2 543 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 TMEM169Q96HH4 297 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 HES2Q9Y543 173 aa33.48■■■□□ 2.95
SSSCA1-207ENST00000533115 K7ELQ4 463 aaPredicted RBP33.47■■■□□ 2.95
SSSCA1-207ENST00000533115 TBX10O75333 385 aa33.47■■■□□ 2.95
SSSCA1-207ENST00000533115 BMP15O95972 392 aa33.47■■■□□ 2.95
SSSCA1-207ENST00000533115 GALTP07902 379 aa33.47■■■□□ 2.95
SSSCA1-207ENST00000533115 DNAJB4Q9UDY4 337 aa33.47■■■□□ 2.95
SSSCA1-207ENST00000533115 PER2O15055 1255 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 NPTXRO95502 500 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 POMCP01189 267 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 IL9P15248 144 aa33.46■■■□□ 2.95
SSSCA1-207ENST00000533115 NDUFV1P49821 464 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms