RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 NLRP10Q86W26 655 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SSH3Q8TE77 659 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TRPV6Q9H1D0 765 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SNX25Q9H3E2 840 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TYW1Q9NV66 732 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 USP32Q8NFA0 1604 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 A0A0G2JND7 137 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 E7ENQ6 273 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SEC24DO94855 1032 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 GSTA1P08263 222 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 GCLCP48506 637 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PMS2P54278 862 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCDC85BQ15834 202 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 HADHQ16836 314 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCDC153Q494R4 210 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 DCLK2Q8N568 766 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 QKIQ96PU8 341 aaKnown RBP eCLIP7.41□□□□□ -1.228e-7■■■■□ 22
TGFBR3-210ENST00000533089 PPP1R16BQ96T49 567 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 UBE2OQ9C0C9 1292 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 GPR108Q9NPR9 543 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 NDUFA13Q9P0J0 144 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 MAGED2Q9UNF1 606 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CARMIL3Q8ND23 1372 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PHF20L1A8MW92 1017 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CFLARO15519 480 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 ATP9AO75110 1047 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCNCP24863 283 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TMED2Q15363 201 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TCP11X2Q5H9J9 407 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SLFN12Q8IYM2 578 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 MAML1Q92585 1016 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 RBM41Q96IZ5 413 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PANK4Q9NVE7 773 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TBK1Q9UHD2 729 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 ARHGAP26Q9UNA1 814 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SPEF1Q9Y4P9 236 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SNX5Q9Y5X3 404 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 ZNF521Q96K83 1311 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 STRNO43815 780 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 RTN3O95197 1032 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SEC24CP53992 1094 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 TFDP1Q14186 410 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 SLFN13Q68D06 897 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PLEKHA7Q6IQ23 1121 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 ARMCX5Q6P1M9 558 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PDZD4Q76G19 769 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCDC84Q86UT8 332 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 METTL23Q86XA0 190 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CHCHD4Q8N4Q1 142 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 MLKLQ8NB16 471 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 B3GALT6Q96L58 329 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 NDNQ99608 321 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CCDC90BQ9GZT6 254 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 CORO1CQ9ULV4 474 aaPredicted RBP7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 PCDHA12Q9UN75 941 aa7.41□□□□□ -1.22
TGFBR3-210ENST00000533089 E7EWF7 191 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PFDN6O15212 129 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 ATAD3BQ5T9A4 648 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 GANCQ8TET4 914 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 TBATAQ96M53 351 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 CSRNP1Q96S65 589 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DBNDD1Q9H9R9 158 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 STX18Q9P2W9 335 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 A0A1B0GW55 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L2P0CJ85 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L3P0CJ86 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L4P0CJ87 422 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L5P0CJ88 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L6P0CJ89 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4L7P0CJ90 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PPIDQ08752 370 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PNOCQ13519 176 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PPP2R5BQ15173 497 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 TMTC4Q5T4D3 741 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 SLC16A10Q8TF71 515 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 LENG1Q96BZ8 264 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 CNBD2Q96M20 576 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PAIP1Q9H074 479 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DUX4Q9UBX2 424 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 POC1B-GALNT4F8VUJ3 575 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DEFA1P59665 94 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DEFA3P59666 94 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 DSG1Q02413 1049 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 CHRNDQ07001 517 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PUDPQ08623 228 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 GRAPQ13588 217 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 ITGA7Q13683 1181 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 ZNF467Q7Z7K2 595 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 TRMT2AQ8IZ69 625 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 GRAPLQ8TC17 118 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 ING2Q9H160 280 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms