RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 UBN1Q9NPG3 1134 aa18.44■□□□□ 0.54
PKP3-209ENST00000533069 TLR9Q9NR96 1032 aa18.44■□□□□ 0.54
PKP3-209ENST00000533069 SPG21Q9NZD8 308 aa18.44■□□□□ 0.54
PKP3-209ENST00000533069 PUF60Q9UHX1 559 aaKnown RBP18.44■□□□□ 0.54
PKP3-209ENST00000533069 DNM3Q9UQ16 869 aa18.44■□□□□ 0.54
PKP3-209ENST00000533069 FSD2A1L4K1 749 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 OFD1O75665 1012 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 CSPG5O95196 566 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 NCLP19338 710 aaKnown RBP18.43■□□□□ 0.54
PKP3-209ENST00000533069 NUCB2P80303 420 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 KRT17Q04695 432 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 HYAL1Q12794 435 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 PPP2R5AQ15172 486 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 HACE1Q8IYU2 909 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 KIFAP3Q92845 792 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 CSRNP2Q9H175 543 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 RSAD1Q9HA92 442 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 PRMT7Q9NVM4 692 aaPredicted RBP18.43■□□□□ 0.54
PKP3-209ENST00000533069 CLDND1Q9NY35 253 aa18.43■□□□□ 0.54
PKP3-209ENST00000533069 FNDC1Q4ZHG4 1894 aaPredicted RBP18.43■□□□□ 0.54
PKP3-209ENST00000533069 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 VPS37CA5D8V6 355 aaPredicted RBP18.42■□□□□ 0.54
PKP3-209ENST00000533069 PP2D1A8MPX8 630 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 EYA4O95677 639 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 ARF4P18085 180 aaPredicted RBP18.42■□□□□ 0.54
PKP3-209ENST00000533069 IRS1P35568 1242 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 NAMPTP43490 491 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 ALDH7A1P49419 539 aaKnown RBP18.42■□□□□ 0.54
PKP3-209ENST00000533069 CTC1Q2NKJ3 1217 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 AGMOQ6ZNB7 445 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 SLC39A11Q8N1S5 342 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 MICAL1Q8TDZ2 1067 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 IFT74Q96LB3 600 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 NT5C3AQ9H0P0 336 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 TBC1D13Q9NVG8 400 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 KANSL3Q9P2N6 904 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 INPP5FQ9Y2H2 1132 aa18.42■□□□□ 0.54
PKP3-209ENST00000533069 VWA3AA6NCI4 1184 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 MEIS3P2A8K0S8 358 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 TNFRSF10AO00220 468 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 FSCN2O14926 492 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 SLC26A4O43511 780 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 ITGA4P13612 1032 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 BCAR1P56945 870 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 RNASELQ05823 741 aaKnown RBP18.41■□□□□ 0.54
PKP3-209ENST00000533069 FAM187BQ17R55 369 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 LONRF3Q496Y0 759 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 HYIQ5T013 277 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 SLC27A1Q6PCB7 646 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 SMG8Q8ND04 991 aaKnown RBP18.41■□□□□ 0.54
PKP3-209ENST00000533069 DEPTORQ8TB45 409 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 CPB2Q96IY4 423 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 AK8Q96MA6 479 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 MMTAG2Q9BU76 263 aaKnown RBP18.41■□□□□ 0.54
PKP3-209ENST00000533069 TRIM6Q9C030 488 aaPredicted RBP18.41■□□□□ 0.54
PKP3-209ENST00000533069 NGRNQ9NPE2 291 aaKnown RBP18.41■□□□□ 0.54
PKP3-209ENST00000533069 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 FAM50BQ9Y247 325 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 IPPQ9Y573 584 aa18.41■□□□□ 0.54
PKP3-209ENST00000533069 A0A1B0GUA9 196 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 B4GALT5O43286 388 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
PKP3-209ENST00000533069 CDC25AP30304 524 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 DDIT3P35638 169 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 PBX3P40426 434 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 EFNA5P52803 228 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 EP400NLQ6ZTU2 488 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 EFHBQ8N7U6 833 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 BSNDQ8WZ55 320 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 TMEM169Q96HH4 297 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 CDCA3Q99618 268 aaPredicted RBP18.4■□□□□ 0.54
PKP3-209ENST00000533069 EIF2AQ9BY44 585 aaKnown RBP18.4■□□□□ 0.54
PKP3-209ENST00000533069 FZD8Q9H461 694 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 IGFLR1Q9H665 355 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 TTC28Q96AY4 2481 aa18.4■□□□□ 0.54
PKP3-209ENST00000533069 E9PMD0 336 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 H3BQ06 376 aaPredicted RBP18.39■□□□□ 0.53
PKP3-209ENST00000533069 INPPL1O15357 1258 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 NRIP1P48552 1158 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 ERVFC1P60507 584 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 ADAM15Q13444 863 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 MAPK6Q16659 721 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 PTCRAQ6ISU1 281 aaPredicted RBP18.39■□□□□ 0.53
PKP3-209ENST00000533069 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.39■□□□□ 0.53
PKP3-209ENST00000533069 CDK5RAP3Q96JB5 506 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 DRC1Q96MC2 740 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 TCF25Q9BQ70 676 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 TIPINQ9BVW5 301 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 NRDE2Q9H7Z3 1164 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 TLE6Q9H808 572 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 ENTPD7Q9NQZ7 604 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
PKP3-209ENST00000533069 SYT1P21579 422 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 GTF2F1P35269 517 aaKnown RBP eCLIP18.38■□□□□ 0.53
PKP3-209ENST00000533069 LTBRP36941 435 aa18.38■□□□□ 0.53
PKP3-209ENST00000533069 PRPF4BQ13523 1007 aaKnown RBP18.38■□□□□ 0.53
PKP3-209ENST00000533069 BMS1Q14692 1282 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms