RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ATP6V1C1P21283 382 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CALB2P22676 271 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 EIF4A3P38919 411 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 STAT2P52630 851 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ANTXR2P58335 489 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CDR2Q01850 454 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 KLHL30Q0D2K2 578 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 STRN3Q13033 797 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ZCWPW2Q504Y3 356 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 SFMBT2Q5VUG0 894 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 SYCE1Q8N0S2 351 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM81BQ96LP2 452 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 PRMT1Q99873 361 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TRAIPQ9BWF2 469 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ZWILCHQ9H900 591 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 RWDD2AQ9UIY3 292 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 RPS6KL1Q9Y6S9 549 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 C5P01031 1676 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TCP11X1B4DZS4 312 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CCDC188H7C350 402 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 GYG2O15488 501 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 NCK2O43639 380 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 UPP2O95045 317 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ERVK-24P63145 666 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 VGLL4Q14135 290 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 LBRQ14739 615 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 VWA3BQ502W6 1294 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 SHC4Q6S5L8 630 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM47EQ6ZV65 393 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ANKRD23Q86SG2 305 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 FBXO11Q86XK2 927 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 RBBP8NLQ8NC74 664 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CHURC1Q8WUH1 139 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 PBKQ96KB5 322 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CYTH2Q99418 400 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM129AQ9BZQ8 928 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 DCLRE1BQ9H816 532 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 NLRC4Q9NPP4 1024 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 MTMR4Q9NYA4 1195 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CPA4Q9UI42 421 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 BLOC1S6Q9UL45 172 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TAF1P21675 1872 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 GRID2IPA4D2P6 1211 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ASAP2O43150 1006 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ATP9AO75110 1047 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 HSD17B3P37058 310 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CETN2P41208 172 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 TXKP42681 527 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ADARP55265 1226 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SNRNP48Q6IEG0 339 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 WDR75Q8IWA0 830 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM133AQ8N9E0 248 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 DTX3LQ8TDB6 740 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 GRAMD1AQ96CP6 724 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ATG4CQ96DT6 458 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF512BQ96KM6 892 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CUEDC2Q9H467 287 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 AZI2Q9H6S1 392 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SH3GLB1Q9Y371 365 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CRYBG1Q9Y4K1 1723 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ARHGAP42A6NI28 874 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 FZD9O00144 591 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 LSM1O15116 133 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 FOXN1O15353 648 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 GTPBP6O43824 516 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 LGR5O75473 907 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 KRT15P19012 456 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PPP4CP60510 307 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CLUL1Q15846 466 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SLC30A10Q6XR72 485 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 TMEM139Q8IV31 216 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 MB21D2Q8IYB1 491 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ATP11CQ8NB49 1132 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF280CQ8ND82 737 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 HDAC7Q8WUI4 952 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ATP6V0A1Q93050 837 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 TRIM11Q96F44 468 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SGIP1Q9BQI5 828 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PSTPIP2Q9H939 334 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 RNPEPL1Q9HAU8 725 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PRDM16Q9HAZ2 1276 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 C6orf50Q9HD87 102 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SMARCAL1Q9NZC9 954 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF232Q9UNY5 417 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 WDR37Q9Y2I8 494 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PASKQ96RG2 1323 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 LGALS16A8MUM7 142 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 NDC80O14777 642 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SART1O43290 800 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CCNT1O60563 726 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ENTPD3O75355 529 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SHMT1P34896 483 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 CAP2P40123 477 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PEX5P50542 639 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 KCNJ2P63252 427 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms