RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SLC5A5Q92911 643 aa4.28□□□□□ -1.72
NUP98-218ENST00000530516 LENG9Q96B70 501 aa4.28□□□□□ -1.72
NUP98-218ENST00000530516 FDXACB1Q9BRP7 624 aaPredicted RBP4.28□□□□□ -1.72
NUP98-218ENST00000530516 TTPALQ9BTX7 342 aa4.28□□□□□ -1.72
NUP98-218ENST00000530516 SLC2A4RGQ9NR83 387 aa4.28□□□□□ -1.72
NUP98-218ENST00000530516 PPP2R3BQ9Y5P8 575 aa4.28□□□□□ -1.72
NUP98-218ENST00000530516 MAFGO15525 162 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 IPO13O94829 963 aaKnown RBP4.27□□□□□ -1.73
NUP98-218ENST00000530516 TOX4O94842 621 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 LSP1P33241 339 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 MANFP55145 182 aaKnown RBP4.27□□□□□ -1.73
NUP98-218ENST00000530516 BPIFB4P59827 614 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 SART3Q15020 963 aaKnown RBP4.27□□□□□ -1.73
NUP98-218ENST00000530516 PDCD1Q15116 288 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 DDB1Q16531 1140 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 ATP13A4Q4VNC1 1196 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 ESPNLQ6ZVH7 1005 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 SLC41A1Q8IVJ1 513 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 AFAP1L2Q8N4X5 818 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 ANKRD53Q8N9V6 530 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 PLA2G15Q8NCC3 412 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 VOPP1Q96AW1 172 aa4.27□□□□□ -1.73
NUP98-218ENST00000530516 RPL10LQ96L21 214 aaKnown RBP4.27□□□□□ -1.73
NUP98-218ENST00000530516 NOL10Q9BSC4 688 aaKnown RBP4.27□□□□□ -1.73
NUP98-218ENST00000530516 KDM1AO60341 852 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 SEC24DO94855 1032 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 GCP02774 474 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 VIL1P09327 827 aaKnown RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 CLEC2LP0C7M8 214 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 POU3F3P20264 500 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 ADRA1BP35368 520 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 STRN3Q13033 797 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 TOB2Q14106 344 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 TRIM25Q14258 630 aaKnown RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 ELAVL1Q15717 326 aaKnown RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 EGFLAMQ63HQ2 1017 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 FAM111BQ6SJ93 734 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 Q6ZPA2 131 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 HTR3DQ70Z44 454 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 DDX46Q7L014 1031 aaKnown RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 C11orf74Q86VG3 221 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 CLRN3Q8NCR9 226 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 PIK3C3Q8NEB9 887 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 TCF25Q9BQ70 676 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 FAM126AQ9BYI3 521 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 OSBPL6Q9BZF3 934 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 NRDE2Q9H7Z3 1164 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 CAAP1Q9H8G2 361 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 TOPORSQ9NS56 1045 aaPredicted RBP4.26□□□□□ -1.73
NUP98-218ENST00000530516 GPRC5BQ9NZH0 403 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 PCDHB6Q9Y5E3 794 aa4.26□□□□□ -1.73
NUP98-218ENST00000530516 GOLGA8BA8MQT2 603 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 MFAP3LO75121 409 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 EYA4O95677 639 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 VSIG10L2P0DP72 767 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 GAAP10253 952 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 KRT4P19013 534 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 SCNN1GP51170 649 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 CD69Q07108 199 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 PITRM1Q5JRX3 1037 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 Q6ZRM9 215 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 FRMD7Q6ZUT3 714 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 LHFPL2Q6ZUX7 228 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 GAREM2Q75VX8 874 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 RASSF3Q86WH2 238 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 RPUSD2Q8IZ73 545 aaKnown RBP4.25□□□□□ -1.73
NUP98-218ENST00000530516 CDYL2Q8N8U2 506 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 USP7Q93009 1102 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 FERMT2Q96AC1 680 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 HIST1H2AHQ96KK5 128 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 HIST1H2AJQ99878 128 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 GPR87Q9BY21 358 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 ANO3Q9BYT9 981 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 IFT22Q9H7X7 185 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 VTA1Q9NP79 307 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 NUMBLQ9Y6R0 609 aa4.25□□□□□ -1.73
NUP98-218ENST00000530516 XDHP47989 1333 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 UBE2QL1A1L167 161 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 ZEB2O60315 1214 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 LY86O95711 162 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 CFBP00751 764 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 JUNP05412 331 aaKnown RBP4.24□□□□□ -1.73
NUP98-218ENST00000530516 BMP5P22003 454 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 KIR2DL3P43628 341 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 SLC25A3Q00325 362 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 TAP1Q03518 808 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 COL10A1Q03692 680 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 PTPAQ15257 358 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 DCAF17Q5H9S7 520 aaPredicted RBP4.24□□□□□ -1.73
NUP98-218ENST00000530516 RABL3Q5HYI8 236 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 LY6G5CQ5SRR4 150 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 FKBP15Q5T1M5 1219 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 NAIF1Q69YI7 327 aaPredicted RBP4.24□□□□□ -1.73
NUP98-218ENST00000530516 CCDC62Q6P9F0 684 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 RHOUQ7L0Q8 258 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 MRGPREQ86SM8 312 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 CMIPQ8IY22 773 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 UNC5BQ8IZJ1 945 aa4.24□□□□□ -1.73
NUP98-218ENST00000530516 MSL3Q8N5Y2 521 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms