RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
SCN3B-206ENST00000530277 ZNF449Q6P9G9 518 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 LRRC31Q6UY01 552 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
SCN3B-206ENST00000530277 GRID2IPA4D2P6 1211 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 H7C0C1 242 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 CSDE1O75534 798 aaKnown RBP13.26□□□□□ -0.29
SCN3B-206ENST00000530277 ATP5OP48047 213 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 ORC1Q13415 861 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 LONRF1Q17RB8 773 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 TADA2BQ86TJ2 420 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 FAM160B2Q86V87 743 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 CREG2Q8IUH2 290 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 ATG4CQ96DT6 458 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 ATP6V1G3Q96LB4 118 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 TXNDC16Q9P2K2 825 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 PLEKHG2Q9H7P9 1386 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCN3B-206ENST00000530277 MAP3K6O95382 1288 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 SALL4Q9UJQ4 1053 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 TM4SF1P30408 202 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 KCNMA1Q12791 1236 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 PPP2R5CQ13362 524 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 CCDC197Q8NCU1 140 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 SEPT10Q9P0V9 454 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 A0A087WUV0 522 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-206ENST00000530277 CCDC188H7C350 402 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 SPAG7O75391 227 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 STAM2O75886 525 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 IL1R1P14778 569 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 EPHA7Q15375 998 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 SNRNP35Q16560 246 aaKnown RBP13.25□□□□□ -0.29
SCN3B-206ENST00000530277 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 HSPH1Q92598 858 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 C18orf8Q96DM3 657 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-206ENST00000530277 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 IVNS1ABPQ9Y6Y0 642 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 GOLGA8RI6L899 631 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 SGPL1O95470 568 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 BAG6P46379 1132 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 PMS2P54278 862 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 DCAF15Q66K64 600 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 ZBTB8OSQ8IWT0 167 aa13.25□□□□□ -0.29
SCN3B-206ENST00000530277 DCCP43146 1447 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 SCP2P22307 547 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 DAB2IPQ5VWQ8 1189 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 KRT39Q6A163 491 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 NLRP14Q86W24 1093 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 RHOT2Q8IXI1 618 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 TPCN2Q8NHX9 752 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 POLR3FQ9H1D9 316 aaPredicted RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 SAYSD1Q9NPB0 183 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 EXOC1LA0A1B0GW35 172 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 PPP1R37O75864 691 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 CUL1Q13616 776 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 APTXQ7Z2E3 356 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 RFX6Q8HWS3 928 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 CCT8L2Q96SF2 557 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 PARP2Q9UGN5 583 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 HMGB1P1B2RPK0 211 aaPredicted RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 CA4P22748 312 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 LSP1P33241 339 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 MAN1A1P33908 653 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 PBX1P40424 430 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 SPOPLQ6IQ16 392 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 EFCAB13Q8IY85 973 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
SCN3B-206ENST00000530277 STK33Q9BYT3 514 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 TAS2R14Q9NYV8 317 aa13.24□□□□□ -0.29
SCN3B-206ENST00000530277 A0A1W2PQJ5 194 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 HSD17B3P37058 310 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-206ENST00000530277 KRT81Q14533 505 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 CBWD5Q5RIA9 395 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 FBXL13Q8NEE6 735 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 KLHL14Q9P2G3 628 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
SCN3B-206ENST00000530277 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms