RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 VCPKMTQ9H867 229 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
CCDC90B-217ENST00000530253 SH2B2O14492 632 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 PRC1O43663 620 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 TBC1D8O95759 1140 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 NDUFB10O96000 172 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 CPA1P15085 419 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 MCCP23508 829 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 ANAPC15P60006 121 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 SREBF2Q12772 1141 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 PSMD2Q13200 908 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 ZYXQ15942 572 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 RNF111Q6ZNA4 994 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 CHST3Q7LGC8 479 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 ANKRD23Q86SG2 305 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 GMCL1P1Q8NEA9 526 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 IGDCC4Q8TDY8 1250 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 LINC01599Q8WXQ3 324 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 JAKMIP1Q96N16 626 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 KIF2CQ99661 725 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 FEZ1Q99689 392 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 TMEM47Q9BQJ4 181 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 KRTAP4-5Q9BYR2 181 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 TM6SF1Q9BZW5 370 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 R3HDMLQ9H3Y0 253 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 SH2D4AQ9H788 454 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 LY9Q9HBG7 655 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 STX8Q9UNK0 236 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 AGTPBP1Q9UPW5 1226 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 ADGRA2Q96PE1 1338 aa10.22□□□□□ -0.77
CCDC90B-217ENST00000530253 A0A0G2JMZ2 1700 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 MYH4Q9Y623 1939 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 F5H6K3 240 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 RBAK-RBAKDNI3L0D1 243 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 LRRN2O75325 713 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 SNHG28P0DPA3 235 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 TOP1P11387 765 aaKnown RBP10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 BMP7P18075 431 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 MCM5P33992 734 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 USP14P54578 494 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 INHBEP58166 350 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 KLRC3Q07444 240 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 CAMK2GQ13555 558 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 BNC2Q6ZN30 1099 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 GADL1Q6ZQY3 521 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 FASTKD5Q7L8L6 764 aaKnown RBP10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 IQCA1Q86XH1 822 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 PHACTR4Q8IZ21 702 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 LPAR1Q92633 364 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 TTC14Q96N46 770 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 REV1Q9UBZ9 1251 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 KLHL3Q9UH77 587 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 SLC45A1Q9Y2W3 748 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 KCTD3Q9Y597 815 aa10.21□□□□□ -0.77
CCDC90B-217ENST00000530253 RLFQ13129 1914 aa10.21□□□□□ -0.78
CCDC90B-217ENST00000530253 HTTP42858 3142 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 FAM221AA4D161 298 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 CA12O43570 354 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 RPS6KB1P23443 525 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 HOXA7P31268 230 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 RNF4P78317 190 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 PWP1Q13610 501 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 PARP14Q460N5 1801 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 CCDC178Q5BJE1 867 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 SPICE1Q8N0Z3 855 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 NUP88Q99567 741 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 UBAC1Q9BSL1 405 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 LRRC2Q9BYS8 371 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 C22orf23Q9BZE7 217 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 TMOD4Q9NZQ9 345 aa10.2□□□□□ -0.78
CCDC90B-217ENST00000530253 PDHXO00330 501 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 WDR46O15213 610 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 PDHBP11177 359 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 PSMA5P28066 241 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 LIFRP42702 1097 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 DAB2P98082 770 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 TROAPQ12815 778 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 IFIT1BQ5T764 474 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 OLFML2BQ68BL8 750 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 SLFN13Q68D06 897 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 BLOC1S2Q6QNY1 142 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 FBXL16Q8N461 479 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 SYTL5Q8TDW5 730 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 ABHD8Q96I13 439 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 UPF3BQ9BZI7 483 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 RPAP3Q9H6T3 665 aaPredicted RBP10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 GCM1Q9NP62 436 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 PARP2Q9UGN5 583 aa10.19□□□□□ -0.78
CCDC90B-217ENST00000530253 ZNF281Q9Y2X9 895 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms