RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
SF3B2-208ENST00000529994 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 ZMYND12Q9H0C1 365 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 SEMA4AQ9H3S1 761 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 UNC45AQ9H3U1 944 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-208ENST00000529994 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 PCDHB2Q9Y5E7 798 aa12.72□□□□□ -0.37
SF3B2-208ENST00000529994 CLUHO75153 1309 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 EPG5Q9HCE0 2579 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 NRP1O14786 923 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 INPPL1O15357 1258 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 POMCP01189 267 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 ALDH2P05091 517 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 SP9P0CG40 484 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 CIITAP33076 1130 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 DNM2P50570 870 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 NONOQ15233 471 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 AGMOQ6ZNB7 445 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 SMG7Q92540 1137 aaKnown RBP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 PHKBQ93100 1093 aa12.71□□□□□ -0.37
SF3B2-208ENST00000529994 FAM193BQ96PV7 902 aaPredicted RBP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 PRG3Q9Y2Y8 225 aaPredicted RBP12.71□□□□□ -0.37
SF3B2-208ENST00000529994 GPR179Q6PRD1 2367 aa12.71□□□□□ -0.38
SF3B2-208ENST00000529994 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
SF3B2-208ENST00000529994 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 ESYT2A0FGR8 921 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 CARNS1A5YM72 827 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 POTEMA6NI47 508 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 DDX11L8A8MPP1 907 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 TEX28O15482 410 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 EDIL3O43854 480 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 ZNF623O75123 536 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 URODP06132 367 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 ADH1AP07327 375 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 SRFP11831 508 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 RAB27AP51159 221 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 JAK3P52333 1124 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
SF3B2-208ENST00000529994 STK3Q13188 491 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 PUM1Q14671 1186 aaKnown RBP eCLIP12.7□□□□□ -0.382e-18■■□□□ 13.1
SF3B2-208ENST00000529994 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 RUFY3Q7L099 469 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 STAMQ92783 540 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 PGBD4Q96DM1 585 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 RPS6KC1Q96S38 1066 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 CEP89Q96ST8 783 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 NIFKQ9BYG3 293 aaKnown RBP12.7□□□□□ -0.38
SF3B2-208ENST00000529994 FOXQ1Q9C009 403 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 INO80BQ9C086 356 aaPredicted RBP12.7□□□□□ -0.38
SF3B2-208ENST00000529994 RSAD1Q9HA92 442 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
SF3B2-208ENST00000529994 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 EPS15L1Q9UBC2 864 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 SIT1Q9Y3P8 196 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 CYP46A1Q9Y6A2 500 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
SF3B2-208ENST00000529994 TDRD15B5MCY1 1934 aaKnown RBP12.69□□□□□ -0.38
SF3B2-208ENST00000529994 MYH15Q9Y2K3 1946 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 IGKV6-21A0A0C4DH24 114 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 LRRN2O75325 713 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 KRT37O76014 449 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 STBD1O95210 358 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 GLUD1P00367 558 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 SOD2P04179 222 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 GNA11P29992 359 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 SFNP31947 248 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 OR1G1P47890 313 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 XKR3Q5GH77 459 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 PLA2G4FQ68DD2 849 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
SF3B2-208ENST00000529994 GET4Q7L5D6 327 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-208ENST00000529994 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 PALB2Q86YC2 1186 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 GLYCTKQ8IVS8 523 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 C1orf210Q8IVY1 113 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-208ENST00000529994 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-208ENST00000529994 RUBCNQ92622 972 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 SLC5A5Q92911 643 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 B3GALT6Q96L58 329 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 CNTNAP3BQ96NU0 1288 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 RIT2Q99578 217 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 PIDD1Q9HB75 910 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 DLGAP2Q9P1A6 1054 aa12.69□□□□□ -0.38
SF3B2-208ENST00000529994 F8W810 466 aa12.68□□□□□ -0.38
SF3B2-208ENST00000529994 LAMP2P13473 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms