RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
CAPN1-217ENST00000529133 CENPFP49454 3210 aa12.59□□□□□ -0.39
CAPN1-217ENST00000529133 CNTNAP2Q9UHC6 1331 aa12.59□□□□□ -0.39
CAPN1-217ENST00000529133 ZMYM2Q9UBW7 1377 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ACKR2O00590 384 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ERLIN2O94905 339 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 PARNO95453 639 aaKnown RBP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 CXCL10P02778 98 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 CD52P31358 61 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 RFC2P35250 354 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 HOXD13P35453 343 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 NLRP12P59046 1061 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 STRN3Q13033 797 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 PAK2Q13177 524 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 PCBP1Q15365 356 aaKnown RBP eCLIP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ZSCAN23Q3MJ62 389 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 COBLL1Q53SF7 1204 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 MRPL4Q9BYD3 311 aaKnown RBP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 IKZF4Q9H2S9 585 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ZMYND8Q9ULU4 1186 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-217ENST00000529133 PADI3Q9ULW8 664 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 MAPK8IP1Q9UQF2 711 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 USP20Q9Y2K6 914 aa12.58□□□□□ -0.4
CAPN1-217ENST00000529133 EVPLQ92817 2033 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 SYCE3A1L190 88 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 GPR182O15218 404 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 PIGRP01833 764 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
CAPN1-217ENST00000529133 SYN1P17600 705 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 PRCPP42785 496 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 NFX1Q12986 1120 aaKnown RBP12.57□□□□□ -0.4
CAPN1-217ENST00000529133 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
CAPN1-217ENST00000529133 DPCR1Q3MIW9 517 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 PLEKHG4Q58EX7 1191 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 MFSD5Q6N075 450 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
CAPN1-217ENST00000529133 IFIH1Q9BYX4 1025 aaKnown RBP12.57□□□□□ -0.4
CAPN1-217ENST00000529133 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
CAPN1-217ENST00000529133 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 TISP43B9A030 160 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 ANKRD63C9JTQ0 380 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 KIF20AO95235 890 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 CSF2RAP15509 400 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 ARF4P18085 180 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 HOXA11P31270 313 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 TYRO3Q06418 890 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 STX1AQ16623 288 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 KNOP1Q1ED39 458 aaKnown RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 TCTN1Q2MV58 587 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 ATF7IP2Q5U623 682 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 SLC39A4Q6P5W5 647 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 ZPBP2Q6X784 338 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 SEPT8Q92599 483 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 BADQ92934 168 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 BICD1Q96G01 975 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 CPB2Q96IY4 423 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 ACO2Q99798 780 aaKnown RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
CAPN1-217ENST00000529133 PIN4Q9Y237 131 aaKnown RBP12.56□□□□□ -0.4
CAPN1-217ENST00000529133 LTBP2Q14767 1821 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 ABLIM1O14639 778 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 TGFB1I1O43294 461 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 MGEA5O60502 916 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 CAPN15O75808 1086 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 PROZP22891 400 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 AXLP30530 894 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 PPP1R2P41236 205 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 RGS19P49795 217 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 LIG4P49917 911 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 STIM1Q13586 685 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 DSC3Q14574 896 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 EEF1DP3Q658K8 133 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-217ENST00000529133 DBF4BQ8NFT6 615 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 APBB2Q92870 758 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 DHTKD1Q96HY7 919 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-217ENST00000529133 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms