RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TMEM87AQ8NBN3 555 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 EIF2AQ9BY44 585 aaKnown RBP15.81■□□□□ 0.12
CAPN1-216ENST00000528739 CSRNP2Q9H175 543 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 C2orf40Q9H1Z8 148 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 RSAD1Q9HA92 442 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 PRMT7Q9NVM4 692 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-216ENST00000528739 CHD7Q9P2D1 2997 aa15.81■□□□□ 0.12
CAPN1-216ENST00000528739 CCDC169A6NNP5 214 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 B4GALT5O43286 388 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 OFD1O75665 1012 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 NPTXRO95502 500 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 EYA4O95677 639 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 BMP15O95972 392 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 POMCP01189 267 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 ARF4P18085 180 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 GTF2F1P35269 517 aaKnown RBP eCLIP15.8■□□□□ 0.124e-13■■■■□ 21.8
CAPN1-216ENST00000528739 NAMPTP43490 491 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 NRIP1P48552 1158 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 NDUFV1P49821 464 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 CEBPZQ03701 1054 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 HYAL1Q12794 435 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 CLUL1Q15846 466 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 MAPK6Q16659 721 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 UBXN11Q5T124 520 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 TMC7Q7Z402 723 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 CABP7Q86V35 215 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 KIFAP3Q92845 792 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
CAPN1-216ENST00000528739 CCDC51Q96ER9 411 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 TMEM169Q96HH4 297 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 TCF25Q9BQ70 676 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 NFKBIZQ9BYH8 718 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 TLE6Q9H808 572 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 UBN1Q9NPG3 1134 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 PARP2Q9UGN5 583 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 HES2Q9Y543 173 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 IPPQ9Y573 584 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 PCDHGC5Q9Y5F6 944 aa15.8■□□□□ 0.12
CAPN1-216ENST00000528739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 PER2O15055 1255 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 PRKCBP05771 671 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 BMP1P13497 986 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 NCLP19338 710 aaKnown RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 SYT1P21579 422 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 UBA7P41226 1012 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 ERVFC1P60507 584 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 PRPF4BQ13523 1007 aaKnown RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 CAMK1Q14012 370 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 AGMOQ6ZNB7 445 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 ADGRD2Q7Z7M1 963 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 RSPH1Q8WYR4 309 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 BSNDQ8WZ55 320 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 CALML4Q96GE6 196 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 INTS4Q96HW7 963 aaKnown RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 NECAB3Q96P71 396 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-216ENST00000528739 KIFC3Q9BVG8 833 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 NT5C3AQ9H0P0 336 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 TBC1D13Q9NVG8 400 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 KANSL3Q9P2N6 904 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 NLRC5Q86WI3 1866 aa15.79■□□□□ 0.12
CAPN1-216ENST00000528739 RALGAPA2Q2PPJ7 1873 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 CNTNAP2Q9UHC6 1331 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 HIP1RO75146 1068 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 PEX3P56589 373 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 PLCB3Q01970 1234 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 DHX8Q14562 1220 aaKnown RBP15.78■□□□□ 0.12
CAPN1-216ENST00000528739 AMHR2Q16671 573 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 PTCRAQ6ISU1 281 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-216ENST00000528739 SLC27A1Q6PCB7 646 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 MRPL10Q7Z7H8 261 aaKnown RBP15.78■□□□□ 0.12
CAPN1-216ENST00000528739 SMG8Q8ND04 991 aaKnown RBP15.78■□□□□ 0.12
CAPN1-216ENST00000528739 ADPGKQ9BRR6 497 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 MMTAG2Q9BU76 263 aaKnown RBP15.78■□□□□ 0.12
CAPN1-216ENST00000528739 NRDE2Q9H7Z3 1164 aa15.78■□□□□ 0.12
CAPN1-216ENST00000528739 PRUNE2Q8WUY3 3088 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 SFI1A8K8P3 1242 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 K7ERI5 159 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 TNFRSF10AO00220 468 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 N4BP3O15049 544 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 LINC01565O15544 149 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 ALDH2P05091 517 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 AKAP5P24588 427 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 MLH1P40692 756 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 OR1G1P47890 313 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-216ENST00000528739 LEXMQ3ZCV2 418 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 PDE12Q6L8Q7 609 aaKnown RBP15.77■□□□□ 0.12
CAPN1-216ENST00000528739 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 SLC39A11Q8N1S5 342 aa15.77■□□□□ 0.12
CAPN1-216ENST00000528739 SPRYD3Q8NCJ5 442 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms