RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
CTNND1-219ENST00000528621 GSG1L2A8MUP6 293 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 TBX3O15119 743 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ZRANB2O95218 330 aaKnown RBP eCLIP9.04□□□□□ -0.967e-11■■■■■ 70
CTNND1-219ENST00000528621 ROR1Q01973 937 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.04□□□□□ -0.963e-6■■■■■ 50.8
CTNND1-219ENST00000528621 NRBF2Q96F24 287 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ZNF560Q96MR9 790 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 PARVAQ9NVD7 372 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 NDE1Q9NXR1 346 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 PDXKO00764 312 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 STILQ15468 1287 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 MFSD14CQ5VZR4 134 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 PDXDC1Q6P996 788 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 GANCQ8TET4 914 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ALKBH8Q96BT7 664 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 DDX50Q9BQ39 737 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ITIH6Q6UXX5 1313 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 FCER1AP12319 257 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 LLGL1Q15334 1064 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 WDR75Q8IWA0 830 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 MMTAG2Q9BU76 263 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 SCOCQ9UIL1 159 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 H3BRJ5 948 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 DDX5P17844 614 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 TXNRD1Q16881 649 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 PPP6R3Q5H9R7 873 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 EPM2AIP1Q7L775 607 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 EFHBQ8N7U6 833 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 FGD4Q96M96 766 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 MAP3K14Q99558 947 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 CAPN11Q9UMQ6 739 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 TMEM247A6NEH6 219 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 CREB3O43889 395 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ITSN1Q15811 1721 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 RHOT1Q8IXI2 618 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 ELOA2Q8IYF1 753 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 RPAP3Q9H6T3 665 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 DNAJC17Q9NVM6 304 aaKnown RBP9.04□□□□□ -0.96
CTNND1-219ENST00000528621 INPP5FQ9Y2H2 1132 aa9.04□□□□□ -0.96
CTNND1-219ENST00000528621 MYO3AQ8NEV4 1616 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 COPS2P61201 443 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 CDC26Q8NHZ8 85 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 PPP1R2P1Q96PQ5 205 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SLC13A4Q9UKG4 626 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 CFLARO15519 480 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 RTN2O75298 545 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TMCC1O94876 653 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 MMEP08473 750 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SDC4P31431 198 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 HDLBPQ00341 1268 aaKnown RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TADA2BQ86TJ2 420 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 OSBPL9Q96SU4 736 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TRIM45Q9H8W5 580 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 APOBEC2Q9Y235 224 aaKnown RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 APOEP02649 317 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 EFHC2Q5JST6 749 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TTC8Q8TAM2 541 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 MYCBPQ99417 103 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SLC9A2Q9UBY0 812 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 EXOSC10Q01780 885 aaKnown RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 DRAP1Q14919 205 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 RASIP1Q5U651 963 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SUN2Q9UH99 717 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 PPRC1Q5VV67 1664 aaKnown RBP9.03□□□□□ -0.96
CTNND1-219ENST00000528621 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 ADORA2BP29275 332 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 AP1B1Q10567 949 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 RBBP7Q16576 425 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 TTC17Q96AE7 1141 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 GRAMD1AQ96CP6 724 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 PITPNM3Q9BZ71 974 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 SP110Q9HB58 689 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 KRT82Q9NSB4 513 aa9.03□□□□□ -0.96
CTNND1-219ENST00000528621 MAP3K20Q9NYL2 800 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms