RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CLTBP09497 229 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ALCAMQ13740 583 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MBTPS1Q14703 1052 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 AMHR2Q16671 573 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 C11orf57Q6ZUT1 292 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FZD8Q9H461 694 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TMEM39AQ9NV64 488 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SIP14410 1827 aa13.36□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PRKCBP05771 671 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SELPP16109 830 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SCP2P22307 547 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MAPK6Q16659 721 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 LRRC8DQ7L1W4 858 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MAP4K3Q8IVH8 894 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PPP1R12CQ9BZL4 782 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 WNT8AQ9H1J5 351 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KCTD10Q9H3F6 313 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 UBE4BO95155 1302 aa13.35□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TISP43B9A030 160 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 B4GALT5O43286 388 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CYP2C18P33260 490 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 STRN3Q13033 797 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 LPIN1Q14693 890 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GPNMBQ14956 572 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FAM187BQ17R55 369 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ANO6Q4KMQ2 910 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 FAM228AQ86W67 206 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 MED15Q96RN5 788 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ANKRD63C9JTQ0 380 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ACKR2O00590 384 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TSPAN1O60635 241 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GHRP10912 638 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 ABCD1P33897 745 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PMS1P54277 932 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CCL23P55773 120 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 STIM1Q13586 685 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SLC39A4Q6P5W5 647 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 SYCP3Q8IZU3 236 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 TARS2Q9BW92 718 aaKnown RBP13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 CTNND2Q9UQB3 1225 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
TRAF3IP2-211ENST00000528599 PSMA7O14818 248 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NBNO60934 754 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 RPS6KA5O75582 802 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 KIF20AO95235 890 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PIGRP01833 764 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PPP1R2P41236 205 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 STX17P56962 302 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PRPF4BQ13523 1007 aaKnown RBP13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CATSPER4Q7RTX7 472 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 P2RX5Q93086 422 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SCLYQ96I15 445 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EXOC7Q9UPT5 735 aa13.33□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HNRNPDLO14979 420 aaKnown RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ERLIN2O94905 339 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ARF4P18085 180 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CCNE1P24864 410 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HOXA11P31270 313 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CD52P31358 61 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PAK1Q13153 545 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TSHZ1Q6ZSZ6 1077 aa13.32□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms