RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 TISP43B9A030 160 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 C19orf81C9J6K1 198 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 RAD51CO43502 376 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 CARSP49589 748 aaKnown RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 MXI1P50539 228 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 ENPEPQ07075 957 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 DMP1Q13316 513 aaPredicted RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 CLUL1Q15846 466 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 TMEM161BQ8NDZ6 487 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 ATP6V0A1Q93050 837 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 GOLPH3Q9H4A6 298 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 PFASO15067 1338 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 ATP2A1O14983 1001 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 STAM2O75886 525 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 PTPRAP18433 802 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 DSG3P32926 999 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 GCLMP48507 274 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 CUL1Q13616 776 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 CDHR1Q96JP9 859 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 SLITRK6Q9H5Y7 841 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 NFASCO94856 1347 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 BHMG1C9JSJ3 638 aaPredicted RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 BUB1BO60566 1050 aaPredicted RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 ABCD1P33897 745 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 NPTX2P47972 431 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 HNRNPH2P55795 449 aaKnown RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 ZSCAN26Q16670 478 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 TBC1D10BQ4KMP7 808 aaPredicted RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 PLA2G4FQ68DD2 849 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 ANO5Q75V66 913 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 USP37Q86T82 979 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 ARHGEF19Q8IW93 802 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 CASKIN2Q8WXE0 1202 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
USH1C-207ENST00000527720 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
USH1C-207ENST00000527720 TMEM150BA6NC51 233 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 GOLGA6CA6NDK9 693 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 FZD9O00144 591 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 LRRN2O75325 713 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 GOLGA6DP0CG33 693 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 RTP1P59025 263 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 KLHL7Q8IXQ5 586 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 FAM76AQ8TAV0 307 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 PLEKHO2Q8TD55 490 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 TMC2Q8TDI7 906 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 GOLGA6AQ9NYA3 693 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 CWC15Q9P013 229 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
USH1C-207ENST00000527720 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
USH1C-207ENST00000527720 KCNA2P16389 499 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 PPP2R5EQ16537 467 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 MCPH1Q8NEM0 835 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 WNK4Q96J92 1243 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
USH1C-207ENST00000527720 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 CARD9Q9H257 536 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
USH1C-207ENST00000527720 LCTP09848 1927 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 KRIT1O00522 736 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 SART1O43290 800 aaKnown RBP16.59■□□□□ 0.25
USH1C-207ENST00000527720 IVLP07476 585 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 ADRB2P07550 413 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 PSAPP07602 524 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 GZMAP12544 262 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 ABCB4P21439 1286 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 CNGA1P29973 690 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 GTF2H1P32780 548 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 KRT39Q6A163 491 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 WRNIP1Q96S55 665 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 THAP2Q9H0W7 228 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
USH1C-207ENST00000527720 IGSF9BQ9UPX0 1349 aa16.59■□□□□ 0.25
USH1C-207ENST00000527720 ZSCAN5CA6NGD5 496 aaPredicted RBP16.58■□□□□ 0.25
USH1C-207ENST00000527720 DDX3YO15523 660 aaKnown RBP16.58■□□□□ 0.25
USH1C-207ENST00000527720 RTN2O75298 545 aa16.58■□□□□ 0.25
USH1C-207ENST00000527720 DGAT1O75907 488 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms