RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 IGF2BP3O00425 579 aaKnown RBP eCLIP6.96□□□□□ -1.3
NXF1-205ENST00000527497 HNRNPDLO14979 420 aaKnown RBP6.96□□□□□ -1.3
NXF1-205ENST00000527497 NPC1O15118 1278 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 FKTNO75072 461 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 LEFTY1O75610 366 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 APOL3O95236 402 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 CNTFP26441 200 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 MCAMP43121 646 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 HERVK_113P62684 666 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 NR0B2Q15466 257 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 GPATCH4Q5T3I0 446 aaKnown RBP6.96□□□□□ -1.3
NXF1-205ENST00000527497 KLHDC7AQ5VTJ3 777 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 BTBD8Q5XKL5 378 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 HLA-DQA1Q5Y7H0 255 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 CIAPIN1Q6FI81 312 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 JMJD6Q6NYC1 403 aaPredicted RBP6.96□□□□□ -1.3
NXF1-205ENST00000527497 NEK10Q6ZWH5 1172 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 SESTD1Q86VW0 696 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 TXLNBQ8N3L3 684 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 TTC30BQ8N4P2 665 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 ATP11CQ8NB49 1132 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 FANCBQ8NB91 859 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 ACDQ96AP0 544 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 SLC35A4Q96G79 324 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 SUCLG2Q96I99 432 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 RSRC1Q96IZ7 334 aaKnown RBP6.96□□□□□ -1.3
NXF1-205ENST00000527497 BARD1Q99728 777 aaKnown RBP6.96□□□□□ -1.3
NXF1-205ENST00000527497 FAM167BQ9BTA0 163 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 CEP41Q9BYV8 373 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 JMJD4Q9H9V9 463 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 C1GALT1Q9NS00 363 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 RIC8BQ9NVN3 520 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 MYO1AQ9UBC5 1043 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 PRSS50Q9UI38 385 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 SLC39A10Q9ULF5 831 aa6.96□□□□□ -1.3
NXF1-205ENST00000527497 FAM90A27PA6NNH2 459 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 LGALS16A8MUM7 142 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 F5H0A9 414 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 H3BUI4 141 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 ARIH2O95376 493 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 TBX18O95935 607 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 CKMT1AP12532 417 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 SRSF11Q05519 484 aaKnown RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 ADCY2Q08462 1091 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 CHRNA2Q15822 529 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 BTNL9Q6UXG8 535 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 KANSL1Q7Z3B3 1105 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 GALNT5Q7Z7M9 940 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
NXF1-205ENST00000527497 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 C3orf20Q8ND61 904 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 ERCC4Q92889 916 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 FOXRED1Q96CU9 486 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 GBP4Q96PP9 640 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 TREX2Q9BQ50 279 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 CHCHD6Q9BRQ6 235 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 CENPOQ9BU64 300 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 CNPPD1Q9BV87 410 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 BRIP1Q9BX63 1249 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 EIF2AQ9BY44 585 aaKnown RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 GREM2Q9H772 168 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 SERHLQ9NQF3 203 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 NKIRAS2Q9NYR9 191 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.3
NXF1-205ENST00000527497 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
NXF1-205ENST00000527497 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
NXF1-205ENST00000527497 FAM170AA1A519 330 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 BICDL2A1A5D9 508 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 GNAT3A8MTJ3 354 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 FAM171A2A8MVW0 826 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 NRG2O14511 850 aaPredicted RBP6.94□□□□□ -1.3
NXF1-205ENST00000527497 HOXC11O43248 304 aaPredicted RBP6.94□□□□□ -1.3
NXF1-205ENST00000527497 SGTAO43765 313 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PLOD3O60568 738 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 KITP10721 976 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 NCAM1P13591 858 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 AMPD1P23109 780 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 LIFRP42702 1097 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PPARAQ07869 468 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 MYBPC3Q14896 1274 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 EMC4Q5J8M3 183 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 CCDC30Q5VVM6 783 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PRAMEF9Q5VWM5 478 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 ZKSCAN2Q63HK3 967 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 BEND5Q7L4P6 421 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.94□□□□□ -1.3
NXF1-205ENST00000527497 CILP2Q8IUL8 1156 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PLEKHO2Q8TD55 490 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 ADAMTS18Q8TE60 1221 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 ASB15Q8WXK1 588 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 DPF2Q92785 391 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 HEPHQ9BQS7 1158 aa6.94□□□□□ -1.3
NXF1-205ENST00000527497 PYM1Q9BRP8 204 aaKnown RBP6.94□□□□□ -1.3
NXF1-205ENST00000527497 AP1M1Q9BXS5 423 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms