RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 KIF23Q02241 960 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 TBL3Q12788 808 aaKnown RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 TOB2Q14106 344 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 COL19A1Q14993 1142 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NONOQ15233 471 aaKnown RBP eCLIP6.25□□□□□ -1.41
CD44-225ENST00000527326 MTFR1Q15390 333 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 DDB1Q16531 1140 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 CCDC122Q5T0U0 273 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 OLFML2BQ68BL8 750 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 CCSAPQ6IQ19 270 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 B3GNT6Q6ZMB0 384 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 Q6ZNX1 250 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 PATL1Q86TB9 770 aaKnown RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NUP93Q8N1F7 819 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 GABPB2Q8TAK5 448 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 PIP4K2CQ8TBX8 421 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 UCMAQ8WVF2 138 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 INPP5DQ92835 1189 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 MPP4Q96JB8 637 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 BTBD6Q96KE9 485 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NUDCD1Q96RS6 583 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 HGH1Q9BTY7 390 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 TPK1Q9H3S4 243 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 RXFP1Q9HBX9 757 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 ABHD10Q9NUJ1 306 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 ATAD3AQ9NVI7 634 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NMRK1Q9NWW6 199 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 RASAL2Q9UJF2 1139 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 SNX12Q9UMY4 172 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 GIT1Q9Y2X7 761 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 ZNF711Q9Y462 761 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 USP15Q9Y4E8 981 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 GPC6Q9Y625 555 aaPredicted RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 USH1CQ9Y6N9 552 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 NUMBLQ9Y6R0 609 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 SYCP2Q9BX26 1530 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 PDS5AQ29RF7 1337 aaKnown RBP6.25□□□□□ -1.41
CD44-225ENST00000527326 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
CD44-225ENST00000527326 A0A0U1RQJ8 604 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 BICDL2A1A5D9 508 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 A8MUI8 341 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 E9PBE3 544 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 PDE2AO00408 941 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 BACH1O14867 736 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 LZTS3O60299 673 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 JAK2O60674 1132 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 TOM1O60784 492 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 HNRNPCL1O60812 293 aaKnown RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 GJB6O95452 261 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ITGB2P05107 769 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 LYNP07948 512 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ARAFP10398 606 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 MAPTP10636 758 aaKnown RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 EPXP11678 715 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 IDEP14735 1019 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CD33P20138 364 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 S100A5P33763 92 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CYLC1P35663 651 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 SYKP43405 635 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 PIP4K2AP48426 406 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 PLCD1P51178 756 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 PLCB3Q01970 1234 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 TNP2Q05952 138 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 SPAG1Q07617 926 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ZNF844Q08AG5 666 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 DPYDQ12882 1025 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CUL1Q13616 776 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 SPCS2Q15005 226 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 HSP90AA5PQ58FG0 334 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ZNF362Q5T0B9 420 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 ZFYVE27Q5T4F4 411 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 TSHZ3Q63HK5 1081 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CLEC4GQ6UXB4 293 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CABP7Q86V35 215 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ZC3H18Q86VM9 953 aaKnown RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 CREG2Q8IUH2 290 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 CCNJLQ8IV13 435 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 LSMEM2Q8N112 164 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 BBS5Q8N3I7 341 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ESX1Q8N693 406 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 PI4K2BQ8TCG2 481 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 LRRC8CQ8TDW0 803 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 FERMT2Q96AC1 680 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 EFHD2Q96C19 240 aaPredicted RBP6.24□□□□□ -1.41
CD44-225ENST00000527326 TLCD1Q96CP7 247 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ANKRD36BP1Q96IX9 119 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 EPSTI1Q96J88 318 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 ZIC5Q96T25 663 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 MEIS3Q99687 375 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 SLC7A5P2Q9GIP4 190 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 GBA3Q9H227 469 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 LRMDAQ9H2I8 198 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 THAP9Q9H5L6 903 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 PARVGQ9HBI0 331 aa6.24□□□□□ -1.41
CD44-225ENST00000527326 MKS1Q9NXB0 559 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms