RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TLCD1Q96CP7 247 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 TBC1D31Q96DN5 1066 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 PABPC3Q9H361 631 aaKnown RBP13.5□□□□□ -0.25
CAPN1-208ENST00000527323 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
CAPN1-208ENST00000527323 ZNF76P36508 570 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 SLC29A2Q14542 456 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 LACTB2Q53H82 288 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-208ENST00000527323 EAPPQ56P03 285 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-208ENST00000527323 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-208ENST00000527323 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 SEC14L1Q92503 715 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 P3H4Q92791 437 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
CAPN1-208ENST00000527323 MYH4Q9Y623 1939 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 FAM13AO94988 1023 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 TMEM253P0C7T8 217 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 RPA1P27694 616 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 ELF1P32519 619 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 PSMC2P35998 433 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 POU5F1Q01860 360 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 PLS1Q14651 629 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 DUPD1Q68J44 220 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 TAX1BP1Q86VP1 789 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 JAMLQ86YT9 394 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 ARHGEF26Q96DR7 871 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 THAP2Q9H0W7 228 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 MCM8Q9UJA3 840 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 ASTN1O14525 1302 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 NAV1Q8NEY1 1877 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 POLR2AP24928 1970 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 CLTAP09496 248 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 DCAF12L1Q5VU92 463 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 AADACL2Q6P093 401 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 EPM2AIP1Q7L775 607 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 LRRC34Q8IZ02 419 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 STK33Q9BYT3 514 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 CTTNBP2NLQ9P2B4 639 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 DIS3Q9Y2L1 958 aaKnown RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 CNTNAP1P78357 1384 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 RGPD3A6NKT7 1758 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-208ENST00000527323 RGPD4Q7Z3J3 1758 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 IGSF9BQ9UPX0 1349 aa13.49□□□□□ -0.25
CAPN1-208ENST00000527323 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SLC16A3O15427 465 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 NMT1P30419 496 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SLC8A1P32418 973 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 CYP2J2P51589 502 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 XRCC4Q13426 336 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 FAM228AQ86W67 206 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 CCDC63Q8NA47 563 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 PRMT1Q99873 361 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 CARD9Q9H257 536 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 RGL1Q9NZL6 768 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 MKI67P46013 3256 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 LRRN2O75325 713 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 RPSAP08865 295 aaKnown RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 ZC2HC1CQ53FD0 456 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 DYDC1Q8WWB3 177 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SEMA4AQ9H3S1 761 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 TTC7AQ9ULT0 858 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 TRIM49P0CI25 452 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 TRIM49CP0CI26 452 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 GHRP10912 638 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 TBC1D1Q86TI0 1168 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SLC30A5Q8TAD4 765 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 ALG3Q92685 438 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 SUFUQ9UMX1 484 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 ALG6Q9Y672 507 aa13.48□□□□□ -0.25
CAPN1-208ENST00000527323 IGKV6D-41A0A0C4DH26 115 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 ADM5C9JUS6 153 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 GBP2P32456 591 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 FMO5P49326 533 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms