RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PSMD2Q13200 908 aa15.08■□□□□ 0
CD44-224ENST00000526669 MORC3Q14149 939 aa15.08■□□□□ 0
CD44-224ENST00000526669 MAPK6Q16659 721 aa15.08■□□□□ 0
CD44-224ENST00000526669 AMHR2Q16671 573 aa15.08■□□□□ 0
CD44-224ENST00000526669 L1TD1Q5T7N2 865 aaKnown RBP15.08■□□□□ 0
CD44-224ENST00000526669 NT5DC1Q5TFE4 455 aa15.08■□□□□ 0
CD44-224ENST00000526669 MFSD5Q6N075 450 aa15.08■□□□□ 0
CD44-224ENST00000526669 ZNF710Q8N1W2 664 aa15.08■□□□□ 0
CD44-224ENST00000526669 BICD1Q96G01 975 aa15.08■□□□□ 0
CD44-224ENST00000526669 NTPCRQ9BSD7 190 aaKnown RBP15.08■□□□□ 0
CD44-224ENST00000526669 NFKBIZQ9BYH8 718 aa15.08■□□□□ 0
CD44-224ENST00000526669 TMEM134Q9H6X4 195 aa15.08■□□□□ 0
CD44-224ENST00000526669 ERVK-5Q9HDB9 667 aa15.08■□□□□ 0
CD44-224ENST00000526669 PRMT7Q9NVM4 692 aaPredicted RBP15.08■□□□□ 0
CD44-224ENST00000526669 PADI3Q9ULW8 664 aa15.08■□□□□ 0
CD44-224ENST00000526669 TBX20Q9UMR3 447 aa15.08■□□□□ 0
CD44-224ENST00000526669 H0YCG3 227 aa15.07■□□□□ 0
CD44-224ENST00000526669 TSPAN1O60635 241 aa15.07■□□□□ 0
CD44-224ENST00000526669 BMP6P22004 513 aa15.07■□□□□ 0
CD44-224ENST00000526669 EFNA5P52803 228 aa15.07■□□□□ 0
CD44-224ENST00000526669 STRN3Q13033 797 aa15.07■□□□□ 0
CD44-224ENST00000526669 PRPF4BQ13523 1007 aaKnown RBP15.07■□□□□ 0
CD44-224ENST00000526669 ZNF658Q5TYW1 1059 aaPredicted RBP15.07■□□□□ 0
CD44-224ENST00000526669 RBM43Q6ZSC3 357 aaKnown RBP15.07■□□□□ 0
CD44-224ENST00000526669 EPM2AIP1Q7L775 607 aaPredicted RBP15.07■□□□□ 0
CD44-224ENST00000526669 TMEM199Q8N511 208 aa15.07■□□□□ 0
CD44-224ENST00000526669 DBF4BQ8NFT6 615 aa15.07■□□□□ 0
CD44-224ENST00000526669 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
CD44-224ENST00000526669 ACCSQ96QU6 501 aa15.07■□□□□ 0
CD44-224ENST00000526669 TARS2Q9BW92 718 aaKnown RBP15.07■□□□□ 0
CD44-224ENST00000526669 STRA6Q9BX79 667 aa15.07■□□□□ 0
CD44-224ENST00000526669 IFIH1Q9BYX4 1025 aaKnown RBP15.07■□□□□ 0
CD44-224ENST00000526669 FZD8Q9H461 694 aa15.07■□□□□ 0
CD44-224ENST00000526669 KCNG1Q9UIX4 513 aa15.07■□□□□ 0
CD44-224ENST00000526669 PIN4Q9Y237 131 aaKnown RBP15.07■□□□□ 0
CD44-224ENST00000526669 PCDHB13Q9Y5F0 798 aa15.07■□□□□ 0
CD44-224ENST00000526669 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
CD44-224ENST00000526669 KIAA1671Q9BY89 1806 aa15.06■□□□□ 0
CD44-224ENST00000526669 SYCE3A1L190 88 aa15.06■□□□□ 0
CD44-224ENST00000526669 TISP43B9A030 160 aa15.06■□□□□ 0
CD44-224ENST00000526669 EIF3DO15371 548 aaKnown RBP eCLIP15.06■□□□□ 0
CD44-224ENST00000526669 MGEA5O60502 916 aa15.06■□□□□ 0
CD44-224ENST00000526669 HARSP12081 509 aaKnown RBP15.06■□□□□ 0
CD44-224ENST00000526669 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
CD44-224ENST00000526669 ARF4P18085 180 aaPredicted RBP15.06■□□□□ 0
CD44-224ENST00000526669 HOXD13P35453 343 aa15.06■□□□□ 0
CD44-224ENST00000526669 PRCPP42785 496 aa15.06■□□□□ 0
CD44-224ENST00000526669 FAM187BQ17R55 369 aa15.06■□□□□ 0
CD44-224ENST00000526669 EEF1DP3Q658K8 133 aa15.06■□□□□ 0
CD44-224ENST00000526669 KLHL10Q6JEL2 608 aa15.06■□□□□ 0
CD44-224ENST00000526669 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
CD44-224ENST00000526669 STXBP4Q6ZWJ1 553 aa15.06■□□□□ 0
CD44-224ENST00000526669 MAP4K3Q8IVH8 894 aa15.06■□□□□ 0
CD44-224ENST00000526669 MYOCDQ8IZQ8 938 aa15.06■□□□□ 0
CD44-224ENST00000526669 SYCP3Q8IZU3 236 aa15.06■□□□□ 0
CD44-224ENST00000526669 SLC17A8Q8NDX2 589 aa15.06■□□□□ 0
CD44-224ENST00000526669 HVCN1Q96D96 273 aa15.06■□□□□ 0
CD44-224ENST00000526669 VWCEQ96DN2 955 aa15.06■□□□□ 0
CD44-224ENST00000526669 ZBTB45Q96K62 511 aaPredicted RBP15.06■□□□□ 0
CD44-224ENST00000526669 GZF1Q9H116 711 aaPredicted RBP15.06■□□□□ 0
CD44-224ENST00000526669 TMX1Q9H3N1 280 aa15.06■□□□□ 0
CD44-224ENST00000526669 ST6GALNAC4Q9H4F1 302 aa15.06■□□□□ 0
CD44-224ENST00000526669 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
CD44-224ENST00000526669 ANKRD63C9JTQ0 380 aa15.05■□□□□ -0
CD44-224ENST00000526669 ACKR2O00590 384 aa15.05■□□□□ -0
CD44-224ENST00000526669 GPR182O15218 404 aa15.05■□□□□ -0
CD44-224ENST00000526669 CXCL10P02778 98 aa15.05■□□□□ -0
CD44-224ENST00000526669 RFC2P35250 354 aa15.05■□□□□ -0
CD44-224ENST00000526669 MATR3P43243 847 aaKnown RBP eCLIP15.05■□□□□ -0
CD44-224ENST00000526669 NLRP12P59046 1061 aa15.05■□□□□ -0
CD44-224ENST00000526669 FPGSQ05932 587 aa15.05■□□□□ -0
CD44-224ENST00000526669 ALCAMQ13740 583 aa15.05■□□□□ -0
CD44-224ENST00000526669 PLEKHG4Q58EX7 1191 aa15.05■□□□□ -0
CD44-224ENST00000526669 SLC39A4Q6P5W5 647 aa15.05■□□□□ -0
CD44-224ENST00000526669 SASS6Q6UVJ0 657 aa15.05■□□□□ -0
CD44-224ENST00000526669 ZBTB33Q86T24 672 aa15.05■□□□□ -0
CD44-224ENST00000526669 USP38Q8NB14 1042 aa15.05■□□□□ -0
CD44-224ENST00000526669 ZNF507Q8TCN5 953 aa15.05■□□□□ -0
CD44-224ENST00000526669 SEPT8Q92599 483 aa15.05■□□□□ -0
CD44-224ENST00000526669 ACO2Q99798 780 aaKnown RBP15.05■□□□□ -0
CD44-224ENST00000526669 MRPL4Q9BYD3 311 aaKnown RBP15.05■□□□□ -0
CD44-224ENST00000526669 AGPAT5Q9NUQ2 364 aa15.05■□□□□ -0
CD44-224ENST00000526669 ANKFY1Q9P2R3 1169 aa15.05■□□□□ -0
CD44-224ENST00000526669 CTNND2Q9UQB3 1225 aa15.05■□□□□ -0
CD44-224ENST00000526669 SQORQ9Y6N5 450 aa15.05■□□□□ -0
CD44-224ENST00000526669 UBE4BO95155 1302 aa15.05■□□□□ -0
CD44-224ENST00000526669 CNTNAP2Q9UHC6 1331 aa15.05■□□□□ -0
CD44-224ENST00000526669 NLRC5Q86WI3 1866 aa15.05■□□□□ -0
CD44-224ENST00000526669 HNRNPDLO14979 420 aaKnown RBP15.04■□□□□ -0
CD44-224ENST00000526669 PARNO95453 639 aaKnown RBP15.04■□□□□ -0
CD44-224ENST00000526669 NPTXRO95502 500 aa15.04■□□□□ -0
CD44-224ENST00000526669 LIG4P49917 911 aa15.04■□□□□ -0
CD44-224ENST00000526669 EPHB4P54760 987 aa15.04■□□□□ -0
CD44-224ENST00000526669 PPIGQ13427 754 aaKnown RBP eCLIP15.04■□□□□ -0
CD44-224ENST00000526669 ZSCAN23Q3MJ62 389 aa15.04■□□□□ -0
CD44-224ENST00000526669 ATF7IP2Q5U623 682 aa15.04■□□□□ -0
CD44-224ENST00000526669 TWF2Q6IBS0 349 aaKnown RBP15.04■□□□□ -0
CD44-224ENST00000526669 TRIML1Q8N9V2 468 aa15.04■□□□□ -0
CD44-224ENST00000526669 LINC01599Q8WXQ3 324 aa15.04■□□□□ -0
CD44-224ENST00000526669 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms