RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 EPHA7Q15375 998 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 IL31Q6EBC2 164 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 KCNK18Q7Z418 384 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 AMOTL1Q8IY63 956 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 ZZZ3Q8IYH5 903 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 STPG3Q8N7X2 389 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF496Q96IT1 587 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-211ENST00000525970 ACAP3Q96P50 834 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 STRBPQ96SI9 672 aaKnown RBP5.81□□□□□ -1.48
CSDE1-211ENST00000525970 MRIQ9BWK5 157 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 PCIF1Q9H4Z3 704 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 NMRK2Q9NPI5 230 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 C1orf112Q9NSG2 853 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
CSDE1-211ENST00000525970 ZFP69BQ9UJL9 534 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 TESMINQ9Y4I5 508 aa5.81□□□□□ -1.48
CSDE1-211ENST00000525970 FRMPD2Q68DX3 1309 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-211ENST00000525970 A6NNZ2 444 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 MUSKO15146 869 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 B4GALT4O60513 344 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 SLPIP03973 132 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 MMEP08473 750 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 COL6A1P12109 1028 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 HSPA6P17066 643 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 PTGS1P23219 599 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 FNTBP49356 437 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF280AP59817 542 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-211ENST00000525970 HERVK_113P62684 666 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 R3HDM1Q15032 1099 aaKnown RBP5.8□□□□□ -1.48
CSDE1-211ENST00000525970 FSCN1Q16658 493 aaKnown RBP5.8□□□□□ -1.48
CSDE1-211ENST00000525970 ARHGAP29Q52LW3 1261 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 ATAT1Q5SQI0 421 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 CATSPEREQ5SY80 951 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 HIPK4Q8NE63 616 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 WDR48Q8TAF3 677 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 TTC17Q96AE7 1141 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 LRGUKQ96M69 825 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 TACO1Q9BSH4 297 aaKnown RBP5.8□□□□□ -1.48
CSDE1-211ENST00000525970 SEC61A2Q9H9S3 476 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 MAN1C1Q9NR34 630 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 UCKL1Q9NWZ5 548 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 TAGLN3Q9UI15 199 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 DNM3Q9UQ16 869 aa5.8□□□□□ -1.48
CSDE1-211ENST00000525970 FOXP2O15409 715 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF623O75123 536 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 C5AR1P21730 350 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ENPP1P22413 925 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ADKP55263 362 aaKnown RBP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 PICALMQ13492 652 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 SAFB2Q14151 953 aaKnown RBP eCLIP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 SAFBQ15424 915 aaKnown RBP eCLIP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 COBLL1Q53SF7 1204 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 C10orf62Q5T681 223 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF585AQ6P3V2 769 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 DPP8Q6V1X1 898 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 TGFBRAP1Q8WUH2 860 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-211ENST00000525970 WWC2-AS2Q96NR7 200 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 GBP4Q96PP9 640 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 MEGF9Q9H1U4 602 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 INCENPQ9NQS7 918 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 ZDHHC9Q9Y397 364 aa5.79□□□□□ -1.48
CSDE1-211ENST00000525970 PRAMEF22A3QJZ6 481 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 RASSF10A6NK89 507 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 KLHL18O94889 574 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 IL18BPO95998 194 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 HRGP04196 525 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 POU2F2P09086 479 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 AOAHP28039 575 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 SERPINB3P29508 390 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 MC4RP32245 332 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 MANFP55145 182 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 SRSF2Q01130 221 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 ZNF267Q14586 743 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 IFIT1BQ5T764 474 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 RALYLQ86SE5 291 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 PALM2Q8IXS6 379 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 ASB15Q8WXK1 588 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 RTF1Q92541 710 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 E2F7Q96AV8 911 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 SLITRK6Q9H5Y7 841 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 KCND1Q9NSA2 647 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 DNAJC28Q9NX36 388 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 BTBD7Q9P203 1132 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 SAP30BPQ9UHR5 308 aaKnown RBP5.78□□□□□ -1.48
CSDE1-211ENST00000525970 MSRAQ9UJ68 235 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 TUBD1Q9UJT1 453 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 GPR45Q9Y5Y3 372 aa5.78□□□□□ -1.48
CSDE1-211ENST00000525970 H0Y858 1186 aa5.77□□□□□ -1.49
CSDE1-211ENST00000525970 AP1G1O43747 822 aa5.77□□□□□ -1.49
CSDE1-211ENST00000525970 OFD1O75665 1012 aa5.77□□□□□ -1.49
CSDE1-211ENST00000525970 AMHP03971 560 aa5.77□□□□□ -1.49
CSDE1-211ENST00000525970 IFIT2P09913 472 aaKnown RBP5.77□□□□□ -1.49
CSDE1-211ENST00000525970 RHCEP18577 417 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms